Aliases for RF00066-015 Gene

Subcategory (RNA class) for RF00066-015 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00066-015 Gene

No data available for External Ids for RF00066-015 Gene

Summaries for RF00066-015 Gene

GeneCards Summary for RF00066-015 Gene

RF00066-015 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-015 Gene

Additional gene information for RF00066-015 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-015 Gene

Genomics for RF00066-015 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00066-015 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J154338 Enhancer 0.6 ENCODE dbSUPER 600.7 +0.3 306 0.1 IKZF1 ZNF384 MEIS2 ZNF148 RF00066-015 RNU7-57P ATP8B2 piR-35056 IL6R
GH01J154337 Enhancer 0.2 dbSUPER 600.7 -0.9 -924 1.5 RF00066-015 RNU7-57P ATP8B2 UBE2Q1 piR-44324 IL6R
GH01J154333 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -4.1 -4053 2.2 HNRNPL GATAD2A CTCF PRDM10 NFKBIZ KDM1A RCOR2 FOXA1 ZNF143 ZSCAN4 UBE2Q1 IL6R IL6R-AS1 SNORA58B UBAP2L MIR190B TPM3 C1orf189 UBE2Q1-AS1 ATP8B2
GH01J154341 Promoter/Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +4.2 4220 2.3 MAX UBE2Q1 RF00066-015 RNU7-57P piR-35056 ATP8B2 IL6R
GH01J154345 Enhancer 0.7 ENCODE dbSUPER 0.4 +6.7 6677 0.2 CTCF ZNF692 ZNF143 REST RAD21 TRIM22 ZNF654 XRCC5 EGR2 RNU7-57P RF00066-015 piR-35056 ATP8B2 IL6R
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-015 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00066-015 Gene

Genomic Locations for RF00066-015 Gene
chr1:154,338,743-154,338,802
(GRCh38/hg38)
Size:
60 bases
Orientation:
Plus strand

Genomic View for RF00066-015 Gene

Genes around RF00066-015 on UCSC Golden Path with GeneCards custom track
RF00066-015 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00066-015 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-015 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-015 Gene

Proteins for RF00066-015 Gene

Post-translational modifications for RF00066-015 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-015 Gene

Domains & Families for RF00066-015 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-015 Gene

Function for RF00066-015 Gene

Phenotypes From GWAS Catalog for RF00066-015 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00066-015 Gene

Localization for RF00066-015 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-015 Gene

Pathways & Interactions for RF00066-015 Gene

PathCards logo

SuperPathways for RF00066-015 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00066-015 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-015 Gene

Drugs & Compounds for RF00066-015 Gene

No Compound Related Data Available

Transcripts for RF00066-015 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00066-015 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006B0E8E_9606 snRNA 60 1

Rfam: RF00066,

RF00066-015 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-015 Gene

No ASD Table

Relevant External Links for RF00066-015 Gene

GeneLoc Exon Structure for
RF00066-015

No data available for mRNA/cDNA for RF00066-015 Gene

Expression for RF00066-015 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-015 Gene

Orthologs for RF00066-015 Gene

No data available for Orthologs and Evolution for RF00066-015 Gene

Paralogs for RF00066-015 Gene

No data available for Paralogs for RF00066-015 Gene

Variants for RF00066-015 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-015 Gene

Disorders for RF00066-015 Gene

No disorders were found for RF00066-015 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-015 Gene

Publications for RF00066-015 Gene

No publications were found for RF00066-015 Gene.

No data available for Mastermind for RF00066-015 Gene

Products for RF00066-015 Gene

Sources for RF00066-015 Gene