Aliases for RF00066-014 Gene

Subcategory (RNA class) for RF00066-014 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00066-014 Gene

No data available for External Ids for RF00066-014 Gene

Summaries for RF00066-014 Gene

GeneCards Summary for RF00066-014 Gene

RF00066-014 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-014 Gene

Additional gene information for RF00066-014 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-014 Gene

Genomics for RF00066-014 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00066-014 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J112634 Enhancer 1 ENCODE dbSUPER 600.7 -1.8 -1810 4.1 ZNF692 PRDM1 PATZ1 IKZF2 TRIM22 ZNF600 PKNOX1 CEBPA SOX13 ARID3A RF00066-014 RNU7-70P ST7L CAPZA1 lnc-CAPZA1-1 lnc-ST7L-5 RF00017-294 MOV10
GH01J112630 Enhancer 0.7 dbSUPER 0.7 +2.6 2566 3.2 PKNOX1 HDAC1 SOX6 EP300 E2F5 AFF1 WT1 PRDM4 HDAC2 ZNF146 ST7L MOV10 RHOC PPM1J ENSG00000225075 CAPZA1 RF00066-014 RNU7-70P MRPL53P1 lnc-ST7L-5
GH01J112627 Enhancer 0.6 dbSUPER 0.4 +5.8 5787 2.7 CEBPA ZBTB44 HMBOX1 ZNF316 TRIM28 TRIM24 SPI1 ADNP CEBPB BRF2 ST7L MOV10 RHOC PPM1J ENSG00000225075 CTTNBP2NL MRPL53P1 CAPZA1 RNU7-70P RF00066-014
GH01J112644 Enhancer 0.4 Ensembl dbSUPER 0.4 -11.0 -11017 2.4 ZNF121 ST7L lnc-CAPZA1-1 lnc-ST7L-5 RF00066-014 RNU7-70P RF00017-294 CAPZA1 MOV10
GH01J112640 Promoter 0.3 Ensembl 0.4 -5.7 -5717 0.2 RNU7-70P RF00066-014 lnc-CAPZA1-1 lnc-ST7L-5 ST7L RF00017-294 CAPZA1 MOV10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-014 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00066-014 Gene

Genomic Locations for RF00066-014 Gene
chr1:112,634,719-112,634,784
(GRCh38/hg38)
Size:
66 bases
Orientation:
Minus strand

Genomic View for RF00066-014 Gene

Genes around RF00066-014 on UCSC Golden Path with GeneCards custom track
RF00066-014 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00066-014 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-014 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-014 Gene

Proteins for RF00066-014 Gene

Post-translational modifications for RF00066-014 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-014 Gene

Domains & Families for RF00066-014 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-014 Gene

Function for RF00066-014 Gene

Phenotypes From GWAS Catalog for RF00066-014 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00066-014 Gene

Localization for RF00066-014 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-014 Gene

Pathways & Interactions for RF00066-014 Gene

PathCards logo

SuperPathways for RF00066-014 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00066-014 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-014 Gene

Drugs & Compounds for RF00066-014 Gene

No Compound Related Data Available

Transcripts for RF00066-014 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00066-014 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000726FFA_9606 snRNA 66 1

Rfam: RF00066,

RF00066-014 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-014 Gene

No ASD Table

Relevant External Links for RF00066-014 Gene

GeneLoc Exon Structure for
RF00066-014

No data available for mRNA/cDNA for RF00066-014 Gene

Expression for RF00066-014 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-014 Gene

Orthologs for RF00066-014 Gene

No data available for Orthologs and Evolution for RF00066-014 Gene

Paralogs for RF00066-014 Gene

No data available for Paralogs for RF00066-014 Gene

Variants for RF00066-014 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-014 Gene

Disorders for RF00066-014 Gene

No disorders were found for RF00066-014 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-014 Gene

Publications for RF00066-014 Gene

No publications were found for RF00066-014 Gene.

No data available for Mastermind for RF00066-014 Gene

Products for RF00066-014 Gene

Sources for RF00066-014 Gene