Aliases for RF00026-938 Gene

Subcategory (RNA class) for RF00026-938 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-938 Gene

No data available for External Ids for RF00026-938 Gene

Summaries for RF00026-938 Gene

GeneCards Summary for RF00026-938 Gene

RF00026-938 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-938 Gene

Additional gene information for RF00026-938 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-938 Gene

Genomics for RF00026-938 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-938 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J053171 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -18.2 -18213 0.3 SP1 GATAD2A CTCF NFKBIZ JUND FOXA1 LARP7 ZNF143 ZNF24 RXRB ENSG00000218713 RF00026-938 RNU6-464P HSALNG0050654 GCM1 MN298114-205 CILK1
GH06J053180 Enhancer 0.8 Ensembl dbSUPER 0.3 -25.9 -25903 3.2 CREB1 ZNF629 ZNF300 ZBTB44 ZBTB20 CTCF ZNF491 ZBTB40 ZIK1 ZNF662 EFHC1 MCM3 ENSG00000218713 GCM1 HSALNG0050654 RF00026-938 RNU6-464P MN298114-205 CILK1
GH06J053187 Enhancer 0.9 ENCODE dbSUPER 0.3 -34.5 -34506 1.2 RNF2 NR2C1 GABPA EED EGR1 ZNF316 MAFF NR2C2 MAFK MAFG ENSG00000218713 HSALNG0050654 RF00026-938 RNU6-464P GCM1 MN298114-205 CILK1
GH06J053148 Promoter 0.6 EPDnew 0.4 +5.0 5048 0.1 NFIC ZNF189 NFIA SNODB927 GCM1 RNU6-464P RF00026-938 MN298114-205 CILK1
GH06J053168 Enhancer 0.6 Ensembl ENCODE 0.4 -14.5 -14542 2.1 TEAD4 PRDM1 EGR1 ATF2 NR3C1 ENSG00000218713 RF00026-938 RNU6-464P HSALNG0050654 GCM1 MN298114-205 CILK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-938 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-938 Gene

Genomic Locations for RF00026-938 Gene
chr6:53,153,795-53,153,898
(GRCh38/hg38)
Size:
104 bases
Orientation:
Minus strand

Genomic View for RF00026-938 Gene

Genes around RF00026-938 on UCSC Golden Path with GeneCards custom track
RF00026-938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-938 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-938 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-938 Gene

Proteins for RF00026-938 Gene

Post-translational modifications for RF00026-938 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-938 Gene

Domains & Families for RF00026-938 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-938 Gene

Function for RF00026-938 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-938 Gene

Localization for RF00026-938 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-938 Gene

Pathways & Interactions for RF00026-938 Gene

PathCards logo

SuperPathways for RF00026-938 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-938 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-938 Gene

Drugs & Compounds for RF00026-938 Gene

No Compound Related Data Available

Transcripts for RF00026-938 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-938 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006D5390_9606 snRNA 104 1

Rfam: RF00026,

RF00026-938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-938 Gene

No ASD Table

Relevant External Links for RF00026-938 Gene

GeneLoc Exon Structure for
RF00026-938

No data available for mRNA/cDNA for RF00026-938 Gene

Expression for RF00026-938 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-938 Gene

Orthologs for RF00026-938 Gene

No data available for Orthologs and Evolution for RF00026-938 Gene

Paralogs for RF00026-938 Gene

No data available for Paralogs for RF00026-938 Gene

Variants for RF00026-938 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-938 Gene

Disorders for RF00026-938 Gene

No disorders were found for RF00026-938 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-938 Gene

Publications for RF00026-938 Gene

No publications were found for RF00026-938 Gene.

No data available for Mastermind for RF00026-938 Gene

Products for RF00026-938 Gene

Sources for RF00026-938 Gene