RF00026-805 Gene (RNA Gene)

 

GC04M088276
GIFtS:
3
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Aliases for RF00026-805 Gene

Data sources for RF00026-805 Gene:

Subcategory (RNA class) for RF00026-805 Gene

snRNA

Aliases for RF00026-805 Gene

No data available for External Ids for RF00026-805 Gene

Summaries for RF00026-805 Gene

GeneCards Summary for RF00026-805 Gene

RF00026-805 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-805 Gene

Additional gene information for RF00026-805 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-805 Gene

Genomics for RF00026-805 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RF00026-805 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J088276 Enhancer 0.7 ENCODE dbSUPER 250.7 -0.8 -763 0.7 SPI1 BHLHE40 ELF1 IKZF1 IKZF2 TCF12 DPF2 RUNX3 RELB ZBTB40 RF00026-805 RNU6-112P PPM1K-DT lnc-ABCG2-2 PPM1K ABCG2
GH04J088275 Enhancer 0.7 ENCODE dbSUPER 250.7 -0.3 -336 0.2 SPI1 BHLHE40 ELF1 IKZF1 IKZF2 TCF12 DPF2 RUNX3 RELB ZBTB40 RF00026-805 RNU6-112P piR-31927 PPM1K-DT lnc-ABCG2-2 PPM1K ABCG2
GH04J088279 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -7.9 -7864 6.7 CHD2 TBP ZBTB10 SP1 FEZF1 NR2C1 MNT SMAD5 ZFP64 MBD2 PPM1K-DT PPM1K lnc-ABCG2-2 HERC6 RF00026-805 RNU6-112P ABCG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-805 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-805 Gene

Latest Assembly
chr4:88,275,205-88,275,308
(GRCh38/hg38)
Size:
104 bases
Orientation:
Minus strand

Genomic View for RF00026-805 Gene

Genes around RF00026-805 on UCSC Golden Path with GeneCards custom track
RF00026-805 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-805 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-805 Gene

Proteins for RF00026-805 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RF00026-805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-805 Gene

Domains & Families for RF00026-805 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-805 Gene

Function for RF00026-805 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-805 Gene

Localization for RF00026-805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-805 Gene

Pathways & Interactions for RF00026-805 Gene

PathCards logo

SuperPathways for RF00026-805 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-805 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-805 Gene

Drugs & Compounds for RF00026-805 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for RF00026-805 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-805 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006E8F18_9606 snRNA 104 1

Rfam: RF00026,

RF00026-805 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-805 Gene

No ASD Table

Relevant External Links for RF00026-805 Gene

GeneLoc Exon Structure for
RF00026-805

No data available for mRNA/cDNA for RF00026-805 Gene

Expression for RF00026-805 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-805 Gene

Orthologs for RF00026-805 Gene

No data available for Orthologs and Evolution for RF00026-805 Gene

Paralogs for RF00026-805 Gene

No data available for Paralogs for RF00026-805 Gene

Variants for RF00026-805 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-805 Gene

Disorders for RF00026-805 Gene

No disorders were found for RF00026-805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-805 Gene

Publications for RF00026-805 Gene

No publications were found for RF00026-805 Gene.

No data available for Mastermind for RF00026-805 Gene

Products for RF00026-805 Gene

Sources for RF00026-805 Gene