Aliases for RF00026-675 Gene

Subcategory (RNA class) for RF00026-675 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-675 Gene

No data available for External Ids for RF00026-675 Gene

Summaries for RF00026-675 Gene

GeneCards Summary for RF00026-675 Gene

RF00026-675 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-675 Gene

Additional gene information for RF00026-675 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-675 Gene

Genomics for RF00026-675 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-675 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J031222 Enhancer 0.8 dbSUPER 600.7 -0.9 -857 2 GATAD2A SOX13 RCOR2 PRDM1 RXRB IRF2 CEBPA FOXK2 KMT2B TCF7 RF00026-675 RNU6-1128P PIK3IP1 RNF185 ENSG00000202019 LIMK2 RF00017-3806
GH22J031214 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.7 +4.2 4165 8.1 GATAD2A ATF7 PRDM10 TFE3 SOX13 NFKBIZ RCOR2 FOXA1 PRDM1 RBFOX2 LIMK2 PLA2G3 RNF185 SFI1 ENSG00000214125 PIK3IP1 EIF4ENIF1 RF00026-675 RNU6-1128P RF00017-3806
GH22J031226 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.6 -6642 5.5 GATAD2A PRDM10 IKZF1 CTCF JUND PRDM1 ZNF143 MTA2 POLR2A RXRB ENSG00000202019 lnc-PIK3IP1-2 LIMK2 SFI1 SELENOM INPP5J LINC01521 PATZ1 RNF185 PIK3IP1
GH22J031225 Enhancer 0.3 dbSUPER 0.7 -2.9 -2880 0.9 PRDM10 ZBTB48 SELENOM INPP5J LINC01521 PATZ1 LIMK2 ENSG00000202019 RF00026-675 RNU6-1128P PIK3IP1 RF00017-3806
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-675 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-675 Gene

Genomic Locations for RF00026-675 Gene
chr22:31,222,745-31,222,853
(GRCh38/hg38)
Size:
109 bases
Orientation:
Minus strand

Genomic View for RF00026-675 Gene

Genes around RF00026-675 on UCSC Golden Path with GeneCards custom track
RF00026-675 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-675 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-675 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-675 Gene

Proteins for RF00026-675 Gene

Post-translational modifications for RF00026-675 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-675 Gene

Domains & Families for RF00026-675 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-675 Gene

Function for RF00026-675 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-675 Gene

Localization for RF00026-675 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-675 Gene

Pathways & Interactions for RF00026-675 Gene

PathCards logo

SuperPathways for RF00026-675 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-675 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-675 Gene

Drugs & Compounds for RF00026-675 Gene

No Compound Related Data Available

Transcripts for RF00026-675 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-675 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000672354_9606 snRNA 109 1

Rfam: RF00026,

RF00026-675 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-675 Gene

No ASD Table

Relevant External Links for RF00026-675 Gene

GeneLoc Exon Structure for
RF00026-675

No data available for mRNA/cDNA for RF00026-675 Gene

Expression for RF00026-675 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-675 Gene

Orthologs for RF00026-675 Gene

No data available for Orthologs and Evolution for RF00026-675 Gene

Paralogs for RF00026-675 Gene

No data available for Paralogs for RF00026-675 Gene

Variants for RF00026-675 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-675 Gene

Disorders for RF00026-675 Gene

No disorders were found for RF00026-675 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-675 Gene

Publications for RF00026-675 Gene

No publications were found for RF00026-675 Gene.

No data available for Mastermind for RF00026-675 Gene

Products for RF00026-675 Gene

Sources for RF00026-675 Gene