Aliases for RF00026-648 Gene

Subcategory (RNA class) for RF00026-648 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00026-648 Gene

No data available for External Ids for RF00026-648 Gene

Summaries for RF00026-648 Gene

GeneCards Summary for RF00026-648 Gene

RF00026-648 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-648 Gene

Additional gene information for RF00026-648 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-648 Gene

Genomics for RF00026-648 Gene

GeneHancer (GH) Regulatory Elements for RF00026-648 Gene

Promoters and enhancers for RF00026-648 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J049793 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 500.7 -0.5 -472 2.2 NCOR1 ZNF623 RBM25 KLF9 SAP130 CEBPB SPI1 BCOR ELF1 ZGPAT RF00026-648 RNU6-919P SLC9A8 SNAI1 B4GALT5 CEBPB TMEM189 RNF114 piR-35672-036
GH20J049788 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 -4.2 -4223 3.3 TCF12 PHB2 ZBTB11 ZNF623 AFF1 TARDBP REST HES1 ZNF740 MYC B4GALT5 CEBPB SLC9A8 SNAI1 TMEM189 RF00026-648 RNU6-919P piR-35672-036
GH20J049800 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +6.1 6093 0.3 EP300 RELA RCOR1 BCL11A CBFB ZNF384 SRF ARNT MEF2B NBN SLC9A8 SNAI1 B4GALT5 CEBPB TMEM189 RNF114 RF00026-648 RNU6-919P
GH20J049796 Enhancer 0.6 ENCODE dbSUPER 0.7 +2.5 2505 0.9 KLF6 ZNF3 ZNF664 KDM1A ZNF770 HNF4A RF00026-648 RNU6-919P SLC9A8
GH20J049804 Enhancer 0.9 ENCODE dbSUPER 0.4 +10.5 10468 1.2 ZNF623 CBFB SRF ARNT MEF2B NBN NFE2 IRF4 IKZF1 NR2F1 RNF114 SLC9A8 RF00026-648 RNU6-919P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-648 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-648 Gene

Genomic Locations for RF00026-648 Gene
chr20:49,794,811-49,794,914
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RF00026-648 Gene

Genes around RF00026-648 on UCSC Golden Path with GeneCards custom track

RF00026-648 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-648 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-648 Gene

Proteins for RF00026-648 Gene

Post-translational modifications for RF00026-648 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-648 Gene

Domains & Families for RF00026-648 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-648 Gene

Function for RF00026-648 Gene

miRNA for RF00026-648 Gene

miRTarBase miRNAs that target RF00026-648

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00026-648 Gene

Localization for RF00026-648 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-648 Gene

Pathways & Interactions for RF00026-648 Gene

PathCards logo

SuperPathways for RF00026-648 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00026-648 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-648 Gene

Drugs & Compounds for RF00026-648 Gene

No Compound Related Data Available

Transcripts for RF00026-648 Gene

mRNA/cDNA for RF00026-648 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-648 Gene

No ASD Table

Relevant External Links for RF00026-648 Gene

GeneLoc Exon Structure for
RF00026-648

Expression for RF00026-648 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-648 Gene

Orthologs for RF00026-648 Gene

No data available for Orthologs and Evolution for RF00026-648 Gene

Paralogs for RF00026-648 Gene

No data available for Paralogs for RF00026-648 Gene

Variants for RF00026-648 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-648 Gene

Disorders for RF00026-648 Gene

No disorders were found for RF00026-648 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-648 Gene

Publications for RF00026-648 Gene

No publications were found for RF00026-648 Gene.

No data available for Mastermind for RF00026-648 Gene

Products for RF00026-648 Gene

Sources for RF00026-648 Gene