RF00026-493 Gene (RNA Gene)

 

GC18M062732
GIFtS:
4

Aliases for RF00026-493 Gene

Subcategory (RNA class) for RF00026-493 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00026-493 Gene

No data available for External Ids for RF00026-493 Gene

Summaries for RF00026-493 Gene

GeneCards Summary for RF00026-493 Gene

RF00026-493 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-493 Gene

Additional gene information for RF00026-493 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-493 Gene

Genomics for RF00026-493 Gene

GeneHancer (GH) Regulatory Elements for RF00026-493 Gene

Promoters and enhancers for RF00026-493 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J062729 Enhancer 0.5 Ensembl 500.7 -0.5 -469 4.8 MEF2C PRDM6 JUNB NFIC MEF2A ZNF770 RUNX3 MYC ZNF331 RF00026-493 RNU6-142P RF00994-447 PHLPP1
GH18J062714 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +13.0 13024 8.2 FOXK2 ZNF217 EP300 CTCF SIN3A NRF1 POLR2G USF1 SP1 NCOR1 PHLPP1 RF00026-493 RNU6-142P
GH18J062723 Enhancer 0.9 ENCODE dbSUPER 0.4 +7.5 7479 0.7 TGIF2 SIN3A FOXA2 KAT7 SAP130 ZNF205 CREM ZGPAT TFAP4 PRDM4 PHLPP1 RNU6-142P RF00026-493
GH18J062730 Enhancer 0.2 Ensembl 0.7 +2.2 2231 0.2 RF00026-493 RNU6-142P PHLPP1
GH18J062725 Enhancer 0.2 Ensembl 0.4 +5.2 5232 0.6 RNU6-142P RF00026-493 PHLPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-493 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-493 Gene

Genomic Locations for RF00026-493 Gene
chr18:62,731,226-62,731,332
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Genomic View for RF00026-493 Gene

Genes around RF00026-493 on UCSC Golden Path with GeneCards custom track

RF00026-493 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-493 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-493 Gene

Proteins for RF00026-493 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RF00026-493 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-493 Gene

Domains & Families for RF00026-493 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-493 Gene

Function for RF00026-493 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

miRNA for RF00026-493 Gene

miRTarBase miRNAs that target RF00026-493

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00026-493 Gene

Localization for RF00026-493 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-493 Gene

Pathways & Interactions for RF00026-493 Gene

PathCards logo

SuperPathways for RF00026-493 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00026-493 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-493 Gene

Drugs & Compounds for RF00026-493 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RF00026-493 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RF00026-493 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-493 Gene

No ASD Table

Relevant External Links for RF00026-493 Gene

GeneLoc Exon Structure for
RF00026-493

Expression for RF00026-493 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-493 Gene

Orthologs for RF00026-493 Gene

No data available for Orthologs and Evolution for RF00026-493 Gene

Paralogs for RF00026-493 Gene

No data available for Paralogs for RF00026-493 Gene

Variants for RF00026-493 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-493 Gene

Disorders for RF00026-493 Gene

No disorders were found for RF00026-493 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-493 Gene

Publications for RF00026-493 Gene

No publications were found for RF00026-493 Gene.

No data available for Mastermind for RF00026-493 Gene

Products for RF00026-493 Gene

Sources for RF00026-493 Gene