Aliases for RF00026-447 Gene

Subcategory (RNA class) for RF00026-447 Gene

snRNA

Number of RNA Genes sources:

2 / 14

Aliases for RF00026-447 Gene

No data available for External Ids for RF00026-447 Gene

Summaries for RF00026-447 Gene

GeneCards Summary for RF00026-447 Gene

RF00026-447 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-447 Gene

Additional gene information for RF00026-447 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-447 Gene

Genomics for RF00026-447 Gene

GeneHancer (GH) Regulatory Elements for RF00026-447 Gene

Promoters and enhancers for RF00026-447 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J049969 Enhancer 0.8 Ensembl ENCODE 500.7 +2.0 1975 1.6 EZH2 ZBTB17 ZFHX2 ZNF621 CBX8 SUZ12 CBX2 FOXP1 RNF2 ZNF571 RF00026-447 RNU6-1313P ENSG00000250286 LUC7L3 EME1 MYCBPAP DLX4 HSALNG0117228
GH17J049967 Enhancer 0.7 Ensembl ENCODE 500.7 +0.6 577 0.8 EZH2 TCF12 SPI1 SUZ12 JUND RNF2 SP1 EGR1 CTBP2 POLR2A RF00026-447 RNU6-1313P DLX4 HSALNG0117228
GH17J049970 Enhancer 0.5 ENCODE 500.7 +1.0 1024 0 EZH2 TCF12 SUZ12 CBX2 RNF2 EGR1 CTBP2 POLR2A RF00026-447 RNU6-1313P EME1 HSALNG0117228
GH17J049965 Enhancer 0.5 ENCODE 500.7 +1.1 1134 0 EZH2 CBX2 RNF2 SUZ12 CTBP2 POLR2A RF00026-447 RNU6-1313P EME1 HSALNG0117228
GH17J049968 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.7 -2.8 -2776 1.6 ZBTB40 NRF1 PHF8 JUND TEAD4 FOS ZFX ZNF639 ZIC2 POLR2A DLX4 LUC7L3 RF00026-447 RNU6-1313P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-447 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-447 Gene

Genomic Locations for RF00026-447 Gene
chr17:49,966,075-49,966,176
(GRCh38/hg38)
Size:
102 bases
Orientation:
Minus strand

Genomic View for RF00026-447 Gene

Genes around RF00026-447 on UCSC Golden Path with GeneCards custom track

RF00026-447 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-447 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-447 Gene

Proteins for RF00026-447 Gene

Post-translational modifications for RF00026-447 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-447 Gene

Domains & Families for RF00026-447 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-447 Gene

Function for RF00026-447 Gene

miRNA for RF00026-447 Gene

miRTarBase miRNAs that target RF00026-447

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00026-447 Gene

Localization for RF00026-447 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-447 Gene

Pathways & Interactions for RF00026-447 Gene

PathCards logo

SuperPathways for RF00026-447 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00026-447 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-447 Gene

Drugs & Compounds for RF00026-447 Gene

No Compound Related Data Available

Transcripts for RF00026-447 Gene

mRNA/cDNA for RF00026-447 Gene

2 RNACentral transcripts :
1 ENA transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-447 Gene

No ASD Table

Relevant External Links for RF00026-447 Gene

GeneLoc Exon Structure for
RF00026-447

Expression for RF00026-447 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-447 Gene

Orthologs for RF00026-447 Gene

No data available for Orthologs and Evolution for RF00026-447 Gene

Paralogs for RF00026-447 Gene

No data available for Paralogs for RF00026-447 Gene

Variants for RF00026-447 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-447 Gene

Disorders for RF00026-447 Gene

No disorders were found for RF00026-447 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-447 Gene

Publications for RF00026-447 Gene

No publications were found for RF00026-447 Gene.

No data available for Mastermind for RF00026-447 Gene

Products for RF00026-447 Gene

Sources for RF00026-447 Gene