Aliases for RF00026-444 Gene

Subcategory (RNA class) for RF00026-444 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00026-444 Gene

No data available for External Ids for RF00026-444 Gene

Summaries for RF00026-444 Gene

GeneCards Summary for RF00026-444 Gene

RF00026-444 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-444 Gene

Additional gene information for RF00026-444 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-444 Gene

Genomics for RF00026-444 Gene

GeneHancer (GH) Regulatory Elements for RF00026-444 Gene

Promoters and enhancers for RF00026-444 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J048088 Enhancer 0.6 Ensembl 500.7 -0.2 -217 0.4 ZNF300 ZNF662 ZNF195 NFIC ZNF184 IKZF3 NFIB ZNF18 LCORL ZNF384 RF00026-444 RNU6-1201P MRPL45P2 ENSG00000253347 EFCAB13 ENSG00000230532 CBX1
GH17J048099 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -12.7 -12710 4.1 RXRA HNRNPK ZNF217 EP300 NRF1 POLR2G SP1 PHF8 SIX5 ZFX SNX11 CBX1 CDK5RAP3 SP2 ENSG00000239291 EFCAB13 ENSG00000253347 ENSG00000264701 ENSG00000230532 UBE2Z
GH17J048085 Enhancer 0.8 Ensembl 0.7 +2.9 2883 1.8 ZNF300 TRIM28 GATAD2B OSR2 ZNF491 BCL11A WT1 ZNF316 NFIC ZBTB17 MRPL45P2 EFCAB13 PRR15L HOXB2 CDK5RAP3 RF00026-444 RNU6-1201P piR-36508 CBX1
GH17J048080 Enhancer 0.8 Ensembl ENCODE 0.4 +9.5 9499 2.6 CTCF CUX1 RAD21 TRIM22 TEAD1 SMC3 ZNF654 ZNF574 ZNF18 HDGF SNX11 COPZ2 PRR15L SKAP1 CBX1 NFE2L1 MIR152 MIR1203 PNPO piR-36508
GH17J048093 Enhancer 0.3 Ensembl 0.7 -4.7 -4717 0.6 FOXA1 PRDM1 SNX11 RF00026-444 RNU6-1201P CBX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-444 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-444 Gene

Genomic Locations for RF00026-444 Gene
chr17:48,088,678-48,088,784
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Genomic View for RF00026-444 Gene

Genes around RF00026-444 on UCSC Golden Path with GeneCards custom track

RF00026-444 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-444 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-444 Gene

Proteins for RF00026-444 Gene

Post-translational modifications for RF00026-444 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-444 Gene

Domains & Families for RF00026-444 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-444 Gene

Function for RF00026-444 Gene

Phenotypes From GWAS Catalog for RF00026-444 Gene

miRNA for RF00026-444 Gene

miRTarBase miRNAs that target RF00026-444

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00026-444 Gene

Localization for RF00026-444 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-444 Gene

Pathways & Interactions for RF00026-444 Gene

PathCards logo

SuperPathways for RF00026-444 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00026-444 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-444 Gene

Drugs & Compounds for RF00026-444 Gene

No Compound Related Data Available

Transcripts for RF00026-444 Gene

mRNA/cDNA for RF00026-444 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-444 Gene

No ASD Table

Relevant External Links for RF00026-444 Gene

GeneLoc Exon Structure for
RF00026-444

Expression for RF00026-444 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-444 Gene

Orthologs for RF00026-444 Gene

No data available for Orthologs and Evolution for RF00026-444 Gene

Paralogs for RF00026-444 Gene

No data available for Paralogs for RF00026-444 Gene

Variants for RF00026-444 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-444 Gene

Disorders for RF00026-444 Gene

No disorders were found for RF00026-444 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-444 Gene

Publications for RF00026-444 Gene

No publications were found for RF00026-444 Gene.

No data available for Mastermind for RF00026-444 Gene

Products for RF00026-444 Gene

Sources for RF00026-444 Gene