Aliases for RF00026-421 Gene

Subcategory (RNA class) for RF00026-421 Gene

snRNA

Quality Score for this RNA gene is

11

Aliases for RF00026-421 Gene

No data available for External Ids for RF00026-421 Gene

Summaries for RF00026-421 Gene

GeneCards Summary for RF00026-421 Gene

RF00026-421 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-421 Gene

Additional gene information for RF00026-421 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-421 Gene

Genomics for RF00026-421 Gene

GeneHancer (GH) Regulatory Elements for RF00026-421 Gene

Promoters and enhancers for RF00026-421 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J017580 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.6 +2.7 2670 3 LCORL FOXA1 MLX RBPJ NR2F1 NR2F6 CREB1 MIXL1 HLF RAD21 PEMT MED9 LOC100419436 RF00026-421 RNU6-468P lnc-RASD1-4 ENSG00000264666 EEF1A1P43
GH17J017574 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE dbSUPER 0.6 -2.5 -2455 2.8 ZIC2 ZFHX2 GLIS1 PEMT TOM1L2 RF00026-421 RNU6-468P lnc-RASD1-4 EEF1A1P43
GH17J017565 Enhancer 1.6 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.0 -10047 8.4 CTCF FOXA1 MLX RBPJ NR2F1 NR2F6 MIXL1 RAD21 NFIB ELF3 PEMT FAM106A KRT16P6 DRC3 RF00026-421 RNU6-468P EEF1A1P43 lnc-RASD1-4
GH17J017561 Enhancer 0.8 ENCODE dbSUPER 0.4 -16.8 -16807 1.4 FOXA1 RAD21 MNT SP1 RXRA FOXA2 JUND ATF3 YY1 ZBTB33 PEMT TOM1L2 TOP3A EEF1A1P43 RF00026-421 RNU6-468P lnc-RASD1-4
GH17J017588 Enhancer 0.3 Ensembl dbSUPER 0.4 +9.9 9870 1 PEMT MED9 ENSG00000264666 lnc-RASD1-4 RF00026-421 RNU6-468P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-421 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-421 Gene

Genomic Locations for RF00026-421 Gene
chr17:17,578,631-17,578,739
(GRCh38/hg38)
Size:
109 bases
Orientation:
Plus strand

Genomic View for RF00026-421 Gene

Genes around RF00026-421 on UCSC Golden Path with GeneCards custom track

RF00026-421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-421 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-421 Gene

Proteins for RF00026-421 Gene

Post-translational modifications for RF00026-421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-421 Gene

Domains & Families for RF00026-421 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-421 Gene

Function for RF00026-421 Gene

Phenotypes From GWAS Catalog for RF00026-421 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-421 Gene

Localization for RF00026-421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-421 Gene

Pathways & Interactions for RF00026-421 Gene

PathCards logo

SuperPathways for RF00026-421 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-421 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00026-421 Gene

Drugs & Compounds for RF00026-421 Gene

No Compound Related Data Available

Transcripts for RF00026-421 Gene

mRNA/cDNA for RF00026-421 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-421 Gene

No ASD Table

Relevant External Links for RF00026-421 Gene

GeneLoc Exon Structure for
RF00026-421

Expression for RF00026-421 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-421 Gene

Orthologs for RF00026-421 Gene

No data available for Orthologs and Evolution for RF00026-421 Gene

Paralogs for RF00026-421 Gene

No data available for Paralogs for RF00026-421 Gene

Variants for RF00026-421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-421 Gene

Disorders for RF00026-421 Gene

No disorders were found for RF00026-421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-421 Gene

Publications for RF00026-421 Gene

No publications were found for RF00026-421 Gene.

No data available for External Links for RF00026-421 Gene

Products for RF00026-421 Gene

Sources for RF00026-421 Gene