Aliases for RF00026-389 Gene

Subcategory (RNA class) for RF00026-389 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-389 Gene

No data available for External Ids for RF00026-389 Gene

Summaries for RF00026-389 Gene

GeneCards Summary for RF00026-389 Gene

RF00026-389 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-389 Gene

Additional gene information for RF00026-389 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-389 Gene

Genomics for RF00026-389 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-389 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J020783 Enhancer 0.2 FANTOM5 600.7 -1.3 -1344 0.2 RF00026-389 RNU6-944P PDILT THUMPD1 ENSG00000260510 REXO5 ERI2 ACSM3
GH16J020774 Enhancer 0.7 ENCODE 0.4 -9.6 -9605 0.2 HNRNPL CTCF PRDM10 ZNF143 RAD21 TRIM22 SMARCA5 ZBTB2 ZNF444 SMC3 REXO5 ERI2 ENSG00000260510 RNU6-944P RF00026-389 THUMPD1 ACSM3
GH16J020767 Enhancer 0.6 dbSUPER 0.4 -16.7 -16677 1 SP1 CEBPA YY1 NR2F2 ZNF395 ZNF384 HNF4A NFIL3 RXRA KDM1A ENSG00000260510 RF00026-389 RNU6-944P THUMPD1 REXO5 ACSM3
GH16J020792 Enhancer 0.5 Ensembl 0.4 +7.9 7892 0.8 ATF7 ATF2 ATF3 JUND JUN DNAH3 TMEM159 RNU6-944P RF00026-389 lnc-THUMPD1-3 REXO5 THUMPD1 ERI2 ACSM3
GH16J020781 Enhancer 0.3 Ensembl 0.7 -2.5 -2508 1.6 SPI1 THUMPD1 REXO5 ERI2 RF00026-389 RNU6-944P ENSG00000260510 ACSM3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-389 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-389 Gene

Genomic Locations for RF00026-389 Gene
chr16:20,784,509-20,784,615
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand

Genomic View for RF00026-389 Gene

Genes around RF00026-389 on UCSC Golden Path with GeneCards custom track
RF00026-389 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-389 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-389 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-389 Gene

Proteins for RF00026-389 Gene

Post-translational modifications for RF00026-389 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-389 Gene

Domains & Families for RF00026-389 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-389 Gene

Function for RF00026-389 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-389 Gene

Localization for RF00026-389 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-389 Gene

Pathways & Interactions for RF00026-389 Gene

PathCards logo

SuperPathways for RF00026-389 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-389 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-389 Gene

Drugs & Compounds for RF00026-389 Gene

No Compound Related Data Available

Transcripts for RF00026-389 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-389 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000685CBA_9606 snRNA 107 1

Rfam: RF00026,

RF00026-389 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-389 Gene

No ASD Table

Relevant External Links for RF00026-389 Gene

GeneLoc Exon Structure for
RF00026-389

No data available for mRNA/cDNA for RF00026-389 Gene

Expression for RF00026-389 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-389 Gene

Orthologs for RF00026-389 Gene

No data available for Orthologs and Evolution for RF00026-389 Gene

Paralogs for RF00026-389 Gene

No data available for Paralogs for RF00026-389 Gene

Variants for RF00026-389 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-389 Gene

Disorders for RF00026-389 Gene

No disorders were found for RF00026-389 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-389 Gene

Publications for RF00026-389 Gene

No publications were found for RF00026-389 Gene.

No data available for Mastermind for RF00026-389 Gene

Products for RF00026-389 Gene

Sources for RF00026-389 Gene