Aliases for RF00026-1151 Gene

Subcategory (RNA class) for RF00026-1151 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00026-1151 Gene

No data available for External Ids for RF00026-1151 Gene

Summaries for RF00026-1151 Gene

GeneCards Summary for RF00026-1151 Gene

RF00026-1151 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-1151 Gene

Additional gene information for RF00026-1151 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-1151 Gene

Genomics for RF00026-1151 Gene

GeneHancer (GH) Regulatory Elements for RF00026-1151 Gene

Promoters and enhancers for RF00026-1151 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ010584 Enhancer 0.2 ENCODE 500.7 +1.7 1669 0.6 RNU6-800P RF00026-1151 lnc-ARHGAP6-4 MID1
GH0XJ010576 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.7 -3.4 -3422 7.6 TCF12 CUX1 EP300 CTBP1 NCOR1 DEK ZNF316 NFIC TCF7L2 TRIM24 MID1 RNU6-800P RF00026-1151 lnc-ARHGAP6-7 lnc-ARHGAP6-4
GH0XJ010613 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 +34.8 34753 7.3 EP300 CTCF TRIM28 SAP30 RAD21 EZH2 SMC3 MXI1 POLR2A OSR2 MID1 lnc-ARHGAP6-4 RF00026-1151 RNU6-800P
GH0XJ010588 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.4 +6.8 6826 2.1 FOXA2 TCF7L2 RAD21 MAX GATA3 CTBP1 PKNOX1 ELF4 ARNT FOXA1 MID1 RNU6-800P RF00026-1151 lnc-ARHGAP6-4
GH0XJ010606 Enhancer 0.8 Ensembl ENCODE 0.3 +25.1 25074 2 TCF12 FOXA2 FOSL2 SIN3A MAFK RXRA HNF4A NFE2L2 BCL3 FOXA1 lnc-ARHGAP6-4 RF00026-1151 RNU6-800P MID1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-1151 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-1151 Gene

Genomic Locations for RF00026-1151 Gene
chrX:10,582,817-10,582,919
(GRCh38/hg38)
Size:
103 bases
Orientation:
Plus strand

Genomic View for RF00026-1151 Gene

Genes around RF00026-1151 on UCSC Golden Path with GeneCards custom track

RF00026-1151 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-1151 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-1151 Gene

Proteins for RF00026-1151 Gene

Post-translational modifications for RF00026-1151 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-1151 Gene

Domains & Families for RF00026-1151 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-1151 Gene

Function for RF00026-1151 Gene

miRNA for RF00026-1151 Gene

miRTarBase miRNAs that target RF00026-1151

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00026-1151 Gene

Localization for RF00026-1151 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-1151 Gene

Pathways & Interactions for RF00026-1151 Gene

PathCards logo

SuperPathways for RF00026-1151 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00026-1151 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-1151 Gene

Drugs & Compounds for RF00026-1151 Gene

No Compound Related Data Available

Transcripts for RF00026-1151 Gene

mRNA/cDNA for RF00026-1151 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-1151 Gene

No ASD Table

Relevant External Links for RF00026-1151 Gene

GeneLoc Exon Structure for
RF00026-1151

Expression for RF00026-1151 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-1151 Gene

Orthologs for RF00026-1151 Gene

No data available for Orthologs and Evolution for RF00026-1151 Gene

Paralogs for RF00026-1151 Gene

No data available for Paralogs for RF00026-1151 Gene

Variants for RF00026-1151 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-1151 Gene

Disorders for RF00026-1151 Gene

No disorders were found for RF00026-1151 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-1151 Gene

Publications for RF00026-1151 Gene

No publications were found for RF00026-1151 Gene.

No data available for Mastermind for RF00026-1151 Gene

Products for RF00026-1151 Gene

Sources for RF00026-1151 Gene