Aliases for RF00026-1140 Gene

Data sources for RF00026-1140 Gene:

Subcategory (RNA class) for RF00026-1140 Gene

snRNA

Aliases for RF00026-1140 Gene

No data available for External Ids for RF00026-1140 Gene

Summaries for RF00026-1140 Gene

GeneCards Summary for RF00026-1140 Gene

RF00026-1140 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-1140 Gene

Additional gene information for RF00026-1140 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-1140 Gene

Genomics for RF00026-1140 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-1140 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J110917 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.5 16481 5 RAD21 NFE2 MAFK ZNF189 TCF7 ATF2 JUNB NFE2L2 ATF7 RUNX3 LPAR1 ENSG00000207401 RF00026-1140 RNU6-432P MUSK
GH09J110911 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +9.3 9264 3.6 FOXA2 SP1 RFX5 RXRA CEBPB FOS NR2F2 LPAR1 C9orf152 RF00026-1140 RNU6-432P ENSG00000207401 HSALNG0073665 MUSK
GH09J110932 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +30.0 30003 2.1 NR2C1 CBFB ZNF24 IKZF1 TCF7 MTA3 ATF2 JUNB IKZF2 ZNF687 ENSG00000207401 RNU6-432P MUSK RF00026-1140 LPAR1
GH09J110926 Enhancer 0.4 Ensembl dbSUPER 0.3 +23.7 23714 0.7 CREB1 RNU6-432P LPAR1 ENSG00000207401 RF00026-1140 MUSK
GH09J110916 Enhancer 0.3 dbSUPER 0.4 +13.2 13233 1.1 FOS LPAR1 RF00026-1140 RNU6-432P ENSG00000207401 MUSK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-1140 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-1140 Gene

Latest Assembly
chr9:110,903,337-110,903,445
(GRCh38/hg38)
Size:
109 bases
Orientation:
Plus strand

Genomic View for RF00026-1140 Gene

Genes around RF00026-1140 on UCSC Golden Path with GeneCards custom track
RF00026-1140 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-1140 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-1140 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-1140 Gene

Proteins for RF00026-1140 Gene

Post-translational modifications for RF00026-1140 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-1140 Gene

Domains & Families for RF00026-1140 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-1140 Gene

Function for RF00026-1140 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-1140 Gene

Localization for RF00026-1140 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-1140 Gene

Pathways & Interactions for RF00026-1140 Gene

PathCards logo

SuperPathways for RF00026-1140 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-1140 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-1140 Gene

Drugs & Compounds for RF00026-1140 Gene

No Compound Related Data Available

Transcripts for RF00026-1140 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-1140 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006E7F01_9606 snRNA 109 1

Rfam: RF00026,

RF00026-1140 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-1140 Gene

No ASD Table

Relevant External Links for RF00026-1140 Gene

GeneLoc Exon Structure for
RF00026-1140

No data available for mRNA/cDNA for RF00026-1140 Gene

Expression for RF00026-1140 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-1140 Gene

Orthologs for RF00026-1140 Gene

No data available for Orthologs and Evolution for RF00026-1140 Gene

Paralogs for RF00026-1140 Gene

No data available for Paralogs for RF00026-1140 Gene

Variants for RF00026-1140 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-1140 Gene

Disorders for RF00026-1140 Gene

No disorders were found for RF00026-1140 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-1140 Gene

Publications for RF00026-1140 Gene

No publications were found for RF00026-1140 Gene.

No data available for Mastermind for RF00026-1140 Gene

Products for RF00026-1140 Gene

Sources for RF00026-1140 Gene