Aliases for RF00026-1135 Gene

Subcategory (RNA class) for RF00026-1135 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-1135 Gene

No data available for External Ids for RF00026-1135 Gene

Summaries for RF00026-1135 Gene

GeneCards Summary for RF00026-1135 Gene

RF00026-1135 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-1135 Gene

Additional gene information for RF00026-1135 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-1135 Gene

Genomics for RF00026-1135 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-1135 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J107673 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -12.3 -12255 4.2 DDX20 ZNF740 ZNF766 NFE2 E2F5 NR2C2 ZBTB11 GABPA MEF2D FOSL1 FJ601684-464 ZNF462 KLF4 RF00026-1135 RNU6-996P RF00017-7794
GH09J107636 Promoter/Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 +24.8 24843 3.5 PRDM1 POLR2A SP1 EZH2 CTCF ZNF512B CEBPB USF1 YY1 GABPA lnc-RAD23B-19 lnc-KLF4-10 RNU6-996P KLF4 RF00026-1135 LOC105376205 RF00017-7794
GH09J107644 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +18.0 18045 2.8 SP1 MAFF YY1 MAFK ZBTB33 JUND NR2F2 RAD21 HNF4A EGR1 lnc-RAD23B-19 RNU6-996P RF00026-1135 LOC105376205 RF00017-7794 KLF4
GH09J107667 Enhancer 0.4 Ensembl ENCODE 0.7 -4.6 -4554 1.6 MAX RF00026-1135 RNU6-996P FJ601684-464 RF00017-7794 KLF4
GH09J107650 Enhancer 0.2 Ensembl 0.4 +12.9 12945 0.6 RF00026-1135 RNU6-996P lnc-RAD23B-19 LOC105376205 RF00017-7794 KLF4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-1135 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-1135 Gene

Genomic Locations for RF00026-1135 Gene
chr9:107,663,140-107,663,246
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Genomic View for RF00026-1135 Gene

Genes around RF00026-1135 on UCSC Golden Path with GeneCards custom track
RF00026-1135 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-1135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-1135 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-1135 Gene

Proteins for RF00026-1135 Gene

Post-translational modifications for RF00026-1135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-1135 Gene

Domains & Families for RF00026-1135 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-1135 Gene

Function for RF00026-1135 Gene

Phenotypes From GWAS Catalog for RF00026-1135 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-1135 Gene

Localization for RF00026-1135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-1135 Gene

Pathways & Interactions for RF00026-1135 Gene

PathCards logo

SuperPathways for RF00026-1135 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-1135 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-1135 Gene

Drugs & Compounds for RF00026-1135 Gene

No Compound Related Data Available

Transcripts for RF00026-1135 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-1135 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000067D5DE_9606 snRNA 107 1

Rfam: RF00026,

RF00026-1135 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-1135 Gene

No ASD Table

Relevant External Links for RF00026-1135 Gene

GeneLoc Exon Structure for
RF00026-1135

No data available for mRNA/cDNA for RF00026-1135 Gene

Expression for RF00026-1135 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-1135 Gene

Orthologs for RF00026-1135 Gene

No data available for Orthologs and Evolution for RF00026-1135 Gene

Paralogs for RF00026-1135 Gene

No data available for Paralogs for RF00026-1135 Gene

Variants for RF00026-1135 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-1135 Gene

Disorders for RF00026-1135 Gene

No disorders were found for RF00026-1135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-1135 Gene

Publications for RF00026-1135 Gene

No publications were found for RF00026-1135 Gene.

No data available for Mastermind for RF00026-1135 Gene

Products for RF00026-1135 Gene

Sources for RF00026-1135 Gene