Aliases for RF00026-1134 Gene

Subcategory (RNA class) for RF00026-1134 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-1134 Gene

No data available for External Ids for RF00026-1134 Gene

Summaries for RF00026-1134 Gene

GeneCards Summary for RF00026-1134 Gene

RF00026-1134 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-1134 Gene

Additional gene information for RF00026-1134 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-1134 Gene

Genomics for RF00026-1134 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-1134 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J107473 Enhancer 0.2 Ensembl 600.7 +0.8 838 1.4 RF00026-1134 RNU6-492P LINC01509 KLF4 LOC112268052
GH09J107484 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -13.3 -13299 8.4 CEBPG CTCF TEAD4 PRDM10 ZNF629 RFX1 KDM1A ZNF692 JUND FOXA1 KLF4 lnc-RAD23B-21 ENSG00000225531 LOC112268053 lnc-KLF4-7 RF00026-1134 RNU6-492P LOC112268052
GH09J107480 Enhancer 0.9 ENCODE dbSUPER 0.4 -5.6 -5589 1.2 CEBPG PRDM10 ZNF512 CTCF JUND PRDM1 CEBPA SCRT2 CEBPB RAD21 KLF4 RNU6-492P RF00026-1134 lnc-RAD23B-21 LOC112268052
GH09J107472 Enhancer 0.3 Ensembl ENCODE 0.7 +2.2 2170 0.8 RF00026-1134 RNU6-492P LINC01509 KLF4 LOC112268052
GH09J107481 Enhancer 0.4 dbSUPER 0.4 -6.4 -6398 0.4 CTCF SCRT2 RAD21 KLF4 RNU6-492P RF00026-1134 lnc-RAD23B-21 LOC112268052
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-1134 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-1134 Gene

Genomic Locations for RF00026-1134 Gene
chr9:107,475,036-107,475,139
(GRCh38/hg38)
Size:
104 bases
Orientation:
Minus strand

Genomic View for RF00026-1134 Gene

Genes around RF00026-1134 on UCSC Golden Path with GeneCards custom track
RF00026-1134 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-1134 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-1134 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-1134 Gene

Proteins for RF00026-1134 Gene

Post-translational modifications for RF00026-1134 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-1134 Gene

Domains & Families for RF00026-1134 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-1134 Gene

Function for RF00026-1134 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-1134 Gene

Localization for RF00026-1134 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-1134 Gene

Pathways & Interactions for RF00026-1134 Gene

PathCards logo

SuperPathways for RF00026-1134 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-1134 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-1134 Gene

Drugs & Compounds for RF00026-1134 Gene

No Compound Related Data Available

Transcripts for RF00026-1134 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-1134 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006D8531_9606 snRNA 104 1

Rfam: RF00026,

RF00026-1134 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-1134 Gene

No ASD Table

Relevant External Links for RF00026-1134 Gene

GeneLoc Exon Structure for
RF00026-1134

No data available for mRNA/cDNA for RF00026-1134 Gene

Expression for RF00026-1134 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-1134 Gene

Orthologs for RF00026-1134 Gene

No data available for Orthologs and Evolution for RF00026-1134 Gene

Paralogs for RF00026-1134 Gene

No data available for Paralogs for RF00026-1134 Gene

Variants for RF00026-1134 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-1134 Gene

Disorders for RF00026-1134 Gene

No disorders were found for RF00026-1134 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-1134 Gene

Publications for RF00026-1134 Gene

No publications were found for RF00026-1134 Gene.

No data available for Mastermind for RF00026-1134 Gene

Products for RF00026-1134 Gene

Sources for RF00026-1134 Gene