Aliases for RF00026-1111 Gene

Data sources for RF00026-1111 Gene:

RNA type for RF00026-1111 Gene

snRNA

Aliases for RF00026-1111 Gene

Previous GeneCards Identifiers for RF00026-1111 Gene

  • GC09M015777

No data available for External Ids for RF00026-1111 Gene

Summaries for RF00026-1111 Gene

GeneCards Summary for RF00026-1111 Gene

RF00026-1111 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-1111 Gene

Additional gene information for RF00026-1111 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-1111 Gene

Genomics for RF00026-1111 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-1111 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ037871 Enhancer 1 Ensembl ENCODE 0.7 +2.2 2192 2.6 NCOR1 JUND NFIC MBD2 EP300 TAF9B TAL1 STAT3 ZNF316 USF2 DYNLT3 RNU6-49P RF00026-1111 lnc-CYBB-1 SYTL5 ENSG00000250349
GH0XJ037882 Enhancer 0.4 Ensembl ENCODE 0.4 +12.7 12694 2 JUND lnc-CYBB-1 SYTL5 RF00026-1111 RNU6-49P DYNLT3 ENSG00000250349
GH0XJ037888 Promoter 0.4 EPDnew 0.4 +18.0 17975 0.1 HNF4A DYNLT3 lnc-CYBB-1 SYTL5 RF00026-1111 RNU6-49P ENSG00000250349
GH0XJ037880 Enhancer 0.2 Ensembl 0.4 +11.1 11092 0.8 lnc-CYBB-1 SYTL5 RF00026-1111 RNU6-49P DYNLT3 ENSG00000250349
GH0XJ037879 Enhancer 0.2 Ensembl 0.4 +10.0 10015 1 lnc-CYBB-1 SYTL5 RF00026-1111 RNU6-49P DYNLT3 ENSG00000250349
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-1111 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-1111 Gene

Latest Assembly
chrX:37,870,109-37,870,215
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand

Genomic View for RF00026-1111 Gene

Genes around RF00026-1111 on UCSC Golden Path with GeneCards custom track
RF00026-1111 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-1111 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-1111 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-1111 Gene

Proteins for RF00026-1111 Gene

Post-translational modifications for RF00026-1111 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-1111 Gene

Domains & Families for RF00026-1111 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-1111 Gene

Function for RF00026-1111 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-1111 Gene

Localization for RF00026-1111 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-1111 Gene

Pathways & Interactions for RF00026-1111 Gene

PathCards logo

SuperPathways for RF00026-1111 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-1111 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-1111 Gene

Drugs & Compounds for RF00026-1111 Gene

No Compound Related Data Available

Transcripts for RF00026-1111 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-1111 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000068F0FA_9606 snRNA 107 1

Rfam: RF00026,

URS000004A895_9606 snRNA 64 1

ENA: AY623052.1:486..549:ncRNA,

RF00026-1111 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-1111 Gene

No ASD Table

Relevant External Links for RF00026-1111 Gene

GeneLoc Exon Structure for
RF00026-1111

No data available for mRNA/cDNA for RF00026-1111 Gene

Expression for RF00026-1111 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-1111 Gene

Orthologs for RF00026-1111 Gene

No data available for Orthologs and Evolution for RF00026-1111 Gene

Paralogs for RF00026-1111 Gene

No data available for Paralogs for RF00026-1111 Gene

Variants for RF00026-1111 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-1111 Gene

Disorders for RF00026-1111 Gene

No disorders were found for RF00026-1111 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-1111 Gene

Publications for RF00026-1111 Gene

No publications were found for RF00026-1111 Gene.

No data available for Mastermind for RF00026-1111 Gene

Products for RF00026-1111 Gene

Sources for RF00026-1111 Gene