RF00026-104 Gene (RNA Gene)

 

GC01P223691
GIFtS:
3
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Aliases for RF00026-104 Gene

Data sources for RF00026-104 Gene:

Subcategory (RNA class) for RF00026-104 Gene

snRNA

Aliases for RF00026-104 Gene

No data available for External Ids for RF00026-104 Gene

Summaries for RF00026-104 Gene

GeneCards Summary for RF00026-104 Gene

RF00026-104 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-104 Gene

Additional gene information for RF00026-104 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-104 Gene

Genomics for RF00026-104 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RF00026-104 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J223698 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.4 +11.5 11470 5.1 IKZF1 BHLHE40 GTF2E2 VEZF1 EP300 RFX5 RELA SMC3 SKIL TBP CAPN2 CICP5 NVL SEPTIN7P13 WDR26 CAPN8 GTF2IP20 LOC105373281 HSALNG0010905 RNU6-1248P
GH01J223699 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +8.5 8453 0.4 MNT CTCF NONO ZIC2 ZNF513 ARNT ZNF395 REST TRIM22 TRIM25 CAPN2 RF00026-104 RNU6-1248P LOC105373281 HSALNG0010902 CAPN8
GH01J223684 Enhancer 0.7 ENCODE 0.4 -5.7 -5667 0.1 CTCF ZNF610 REST TRIM22 SMC3 RAD21 YY1 ZNF2 ZFP37 ZNF24 CAPN8 HSALNG0010902 RF00026-104 RNU6-1248P CAPN2 LOC105373281
GH01J223696 Enhancer 0.7 ENCODE 0.4 +6.5 6533 0.1 CTCF BHLHE40 REST TRIM22 RAD21 ZBTB33 RBM39 ZNF143 LARP7 ZBTB8A CICP5 NVL SEPTIN7P13 WDR26 CAPN2 RF00026-104 RNU6-1248P LOC105373281 HSALNG0010902 CAPN8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-104 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-104 Gene

Latest Assembly
chr1:223,690,051-223,690,158
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for RF00026-104 Gene

Genes around RF00026-104 on UCSC Golden Path with GeneCards custom track
RF00026-104 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-104 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-104 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-104 Gene

Proteins for RF00026-104 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RF00026-104 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-104 Gene

Domains & Families for RF00026-104 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-104 Gene

Function for RF00026-104 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-104 Gene

Localization for RF00026-104 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-104 Gene

Pathways & Interactions for RF00026-104 Gene

PathCards logo

SuperPathways for RF00026-104 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-104 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-104 Gene

Drugs & Compounds for RF00026-104 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for RF00026-104 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-104 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000062FA2D_9606 snRNA 108 1

Rfam: RF00026,

RF00026-104 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-104 Gene

No ASD Table

Relevant External Links for RF00026-104 Gene

GeneLoc Exon Structure for
RF00026-104

No data available for mRNA/cDNA for RF00026-104 Gene

Expression for RF00026-104 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-104 Gene

Orthologs for RF00026-104 Gene

No data available for Orthologs and Evolution for RF00026-104 Gene

Paralogs for RF00026-104 Gene

No data available for Paralogs for RF00026-104 Gene

Variants for RF00026-104 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-104 Gene

Disorders for RF00026-104 Gene

No disorders were found for RF00026-104 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-104 Gene

Publications for RF00026-104 Gene

No publications were found for RF00026-104 Gene.

No data available for Mastermind for RF00026-104 Gene

Products for RF00026-104 Gene

Sources for RF00026-104 Gene