Aliases for RF00026-102 Gene

Subcategory (RNA class) for RF00026-102 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00026-102 Gene

No data available for External Ids for RF00026-102 Gene

Summaries for RF00026-102 Gene

GeneCards Summary for RF00026-102 Gene

RF00026-102 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-102 Gene

Additional gene information for RF00026-102 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-102 Gene

Genomics for RF00026-102 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-102 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J212691 Enhancer 0.7 FANTOM5 600.7 -0.4 -449 0.6 PKNOX1 DPF2 RUNX3 ARNT IKZF1 BMI1 NR2F1 JUNB BATF EBF1 RF00026-102 BATF3 lnc-BATF3-4 lnc-FAM71A-1 FAM71A
GH01J212694 Enhancer 0.5 FANTOM5 Ensembl 600.7 +1.0 1013 1 ZNF600 RF00026-102 BATF3 lnc-BATF3-4 FAM71A
GH01J212689 Enhancer 0.9 FANTOM5 Ensembl 0.7 -2.3 -2342 1 ARHGAP35 CREB1 PRDM1 ZSCAN4 YBX3 TARDBP TSC22D4 MCM3 YBX1 TRIM24 SNORA16B PACC1 BATF3 INTS7 ENSG00000229832 FLVCR1-DT TATDN3 RF00026-102 lnc-BATF3-4 lnc-FAM71A-1
GH01J212681 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -11.0 -10964 10.2 SP1 PRDM10 POLR2A BACH1 ETV6 LARP7 JUND PRDM1 RELA ZIC2 ATF3 ENSG00000235862 FAM71A VASH2 BATF3 RPL21P28 FLVCR1-DT RPS6KC1 SPATA45 TATDN3
GH01J212670 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -20.7 -20740 1.3 PRDM10 ZNF629 ZNF692 ZNF174 JUND POLR2A PATZ1 ZNF600 ZNF341 ZNF792 BATF3 ATF3 RPS6KC1 lnc-FAM71A-1 RF00026-102 FAM71A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-102 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-102 Gene

Genomic Locations for RF00026-102 Gene
chr1:212,692,264-212,692,367
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RF00026-102 Gene

Genes around RF00026-102 on UCSC Golden Path with GeneCards custom track
RF00026-102 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00026-102 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-102 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-102 Gene

Proteins for RF00026-102 Gene

Post-translational modifications for RF00026-102 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-102 Gene

Domains & Families for RF00026-102 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-102 Gene

Function for RF00026-102 Gene

Phenotypes From GWAS Catalog for RF00026-102 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-102 Gene

Localization for RF00026-102 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-102 Gene

Pathways & Interactions for RF00026-102 Gene

PathCards logo

SuperPathways for RF00026-102 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-102 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-102 Gene

Drugs & Compounds for RF00026-102 Gene

No Compound Related Data Available

Transcripts for RF00026-102 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-102 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006FC772_9606 snRNA 104 1

Rfam: RF00026,

RF00026-102 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-102 Gene

No ASD Table

Relevant External Links for RF00026-102 Gene

GeneLoc Exon Structure for
RF00026-102

No data available for mRNA/cDNA for RF00026-102 Gene

Expression for RF00026-102 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-102 Gene

Orthologs for RF00026-102 Gene

No data available for Orthologs and Evolution for RF00026-102 Gene

Paralogs for RF00026-102 Gene

No data available for Paralogs for RF00026-102 Gene

Variants for RF00026-102 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-102 Gene

Disorders for RF00026-102 Gene

No disorders were found for RF00026-102 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-102 Gene

Publications for RF00026-102 Gene

No publications were found for RF00026-102 Gene.

No data available for Mastermind for RF00026-102 Gene

Products for RF00026-102 Gene

Sources for RF00026-102 Gene