Aliases for RF00026-100 Gene

Subcategory (RNA class) for RF00026-100 Gene

snRNA

Quality Score for this RNA gene is

11

Aliases for RF00026-100 Gene

No data available for External Ids for RF00026-100 Gene

Summaries for RF00026-100 Gene

GeneCards Summary for RF00026-100 Gene

RF00026-100 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-100 Gene

Additional gene information for RF00026-100 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-100 Gene

Genomics for RF00026-100 Gene

GeneHancer (GH) Regulatory Elements for RF00026-100 Gene

Promoters and enhancers for RF00026-100 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J203319 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.3 -5295 9.8 SP1 CTCF ZNF362 CC2D1A ETV6 NFYC RELA HLF L3MBTL2 RAD21 ZC3H11A FMOD HNRNPA1P59 ZBED6 SNRPE ENSG00000229652 BTG2 ENSG00000236439 TMEM183A RABIF
GH01J203315 Enhancer 1 ENCODE dbSUPER 0.6 +2.1 2059 2.8 GATA3 TCF7L2 ZNF217 MNT MAFK SP7 SMARCA4 PRDM1 CREB1 ZBTB8A FMOD RNU6-487P RF00026-100 BTG2
GH01J203312 Enhancer 1.1 ENCODE dbSUPER 0.4 +7.1 7122 1 SMARCE1 RUNX1 CC2D1A RBM39 L3MBTL2 DACH1 TEAD4 ZKSCAN8 ZNF148 GTF2F1 ZC3H11A HNRNPA1P59 LAX1 ZBED6 SNRPE ENSG00000236439 BTG2 RF00026-100 RNU6-487P
GH01J203338 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -20.1 -20113 3.2 CTCF ZNF362 CC2D1A RAD21 ZNF121 TEAD4 GTF2F1 SP1 ZNF384 MLLT1 NONHSAG003993.2 CHIT1 LINC01136 BTG2 RNU6-487P OPTC PRELP ATP2B4 ADORA1 ENSG00000224671
GH01J203311 Enhancer 0.6 ENCODE dbSUPER 0.4 +7.8 7831 0.3 SMAD5 ZBTB20 POLR2A BTG2 RF00026-100 RNU6-487P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-100 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-100 Gene

Genomic Locations for RF00026-100 Gene
chr1:203,318,996-203,319,099
(GRCh38/hg38)
Size:
104 bases
Orientation:
Minus strand

Genomic View for RF00026-100 Gene

Genes around RF00026-100 on UCSC Golden Path with GeneCards custom track

RF00026-100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-100 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-100 Gene

Proteins for RF00026-100 Gene

Post-translational modifications for RF00026-100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-100 Gene

Domains & Families for RF00026-100 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-100 Gene

Function for RF00026-100 Gene

Phenotypes From GWAS Catalog for RF00026-100 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-100 Gene

Localization for RF00026-100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-100 Gene

Pathways & Interactions for RF00026-100 Gene

PathCards logo

SuperPathways for RF00026-100 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-100 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00026-100 Gene

Drugs & Compounds for RF00026-100 Gene

No Compound Related Data Available

Transcripts for RF00026-100 Gene

mRNA/cDNA for RF00026-100 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-100 Gene

No ASD Table

Relevant External Links for RF00026-100 Gene

GeneLoc Exon Structure for
RF00026-100

Expression for RF00026-100 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-100 Gene

Orthologs for RF00026-100 Gene

No data available for Orthologs and Evolution for RF00026-100 Gene

Paralogs for RF00026-100 Gene

No data available for Paralogs for RF00026-100 Gene

Variants for RF00026-100 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-100 Gene

Disorders for RF00026-100 Gene

No disorders were found for RF00026-100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-100 Gene

Publications for RF00026-100 Gene

No publications were found for RF00026-100 Gene.

No data available for External Links for RF00026-100 Gene

Products for RF00026-100 Gene

Sources for RF00026-100 Gene