Aliases for RF00026-064 Gene

Data sources for RF00026-064 Gene:

Subcategory (RNA class) for RF00026-064 Gene

snRNA

Aliases for RF00026-064 Gene

No data available for External Ids for RF00026-064 Gene

Summaries for RF00026-064 Gene

GeneCards Summary for RF00026-064 Gene

RF00026-064 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-064 Gene

Additional gene information for RF00026-064 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-064 Gene

Genomics for RF00026-064 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-064 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J116411 Enhancer 1.2 Ensembl ENCODE dbSUPER 250.7 +1.8 1768 1.8 MXD4 HOMEZ KDM6A THAP11 ZNF511 SMAD4 SAP130 MIER3 ZSCAN9 KMT2B RF00026-064 RNU6-817P ATP1A1 HSALNG0006327 ATP1A1-AS1 NONHSAG002531.2 CD58
GH01J116413 Enhancer 0.4 Ensembl dbSUPER 250.7 +0.6 568 0.2 ZNF664 HSALNG0006327 HSALNG0006328 RF00026-064 RNU6-817P ATP1A1-AS1 NONHSAG002531.2 ATP1A1 CD58
GH01J116408 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.1 4119 2.3 TBP IKZF1 MBD2 ARNT ZEB2 TAL1 RXRA RELA NCOR1 MYNN ATP1A1 RF00026-064 RNU6-817P NONHSAG002531.2 ATP1A1-AS1 CD58
GH01J116404 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +9.0 9014 2.7 SMAD5 ZEB2 RBM22 TAL1 FOSL1 SUPT5H NRF1 ZBTB33 NFE2 TEAD4 ATP1A1-AS1 ATP1A1 NONHSAG002531.2 RF00026-064 RNU6-817P CD58
GH01J116402 Enhancer 0.6 Ensembl dbSUPER 0.4 +11.0 10968 1 ZNF189 POLR2A PAF1 ZBTB17 EMSY NONHSAG002531.2 ATP1A1 RF00026-064 RNU6-817P ATP1A1-AS1 CD58
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-064 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-064 Gene

Latest Assembly
chr1:116,413,766-116,413,869
(GRCh38/hg38)
Size:
104 bases
Orientation:
Minus strand

Genomic View for RF00026-064 Gene

Genes around RF00026-064 on UCSC Golden Path with GeneCards custom track
RF00026-064 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-064 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-064 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-064 Gene

Proteins for RF00026-064 Gene

Post-translational modifications for RF00026-064 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-064 Gene

Domains & Families for RF00026-064 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-064 Gene

Function for RF00026-064 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-064 Gene

Localization for RF00026-064 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-064 Gene

Pathways & Interactions for RF00026-064 Gene

PathCards logo

SuperPathways for RF00026-064 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-064 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-064 Gene

Drugs & Compounds for RF00026-064 Gene

No Compound Related Data Available

Transcripts for RF00026-064 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-064 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006D6E67_9606 snRNA 104 1

Rfam: RF00026,

RF00026-064 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-064 Gene

No ASD Table

Relevant External Links for RF00026-064 Gene

GeneLoc Exon Structure for
RF00026-064

No data available for mRNA/cDNA for RF00026-064 Gene

Expression for RF00026-064 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-064 Gene

Orthologs for RF00026-064 Gene

No data available for Orthologs and Evolution for RF00026-064 Gene

Paralogs for RF00026-064 Gene

No data available for Paralogs for RF00026-064 Gene

Variants for RF00026-064 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-064 Gene

Disorders for RF00026-064 Gene

No disorders were found for RF00026-064 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-064 Gene

Publications for RF00026-064 Gene

No publications were found for RF00026-064 Gene.

No data available for Mastermind for RF00026-064 Gene

Products for RF00026-064 Gene

Sources for RF00026-064 Gene