RF00026-045 Gene (RNA Gene)

 

GC01M064030
GIFtS:
3

Aliases for RF00026-045 Gene

Subcategory (RNA class) for RF00026-045 Gene

snRNA

Quality Score for this RNA gene is

11

Aliases for RF00026-045 Gene

No data available for External Ids for RF00026-045 Gene

Summaries for RF00026-045 Gene

GeneCards Summary for RF00026-045 Gene

RF00026-045 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-045 Gene

Additional gene information for RF00026-045 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-045 Gene

Genomics for RF00026-045 Gene

GeneHancer (GH) Regulatory Elements for RF00026-045 Gene

Promoters and enhancers for RF00026-045 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J064030 Enhancer 0.3 FANTOM5 dbSUPER 750.6 -1.6 -1630 0.4 RNU6-809P RF00026-045 lnc-ITGB3BP-10 ROR1
GH01J064005 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +23.5 23499 4.2 POU5F1 TEAD4 CBFA2T2 SMARCA4 CREB1 FOXA2 SOX13 MAX SP1 JUND RF00026-045 RNU6-809P lnc-UBE2U-2 ROR1
GH01J064019 Enhancer 0.7 ENCODE dbSUPER 0.4 +8.2 8190 2.3 CBFA2T2 SCRT2 RAD51 USF1 USF2 IRF2 ZNF146 ZNF354B ITGB3BP SLC2A3P2 LINC01359 RF00026-045 RNU6-809P lnc-UBE2U-2 ROR1
GH01J063999 Enhancer 0.9 Ensembl ENCODE 0.3 +28.3 28299 2.2 ZNF362 ZNF384 SP7 PRDM10 ZNF639 ZEB2 ZNF629 ZNF692 ZXDB OSR2 RF00026-045 RNU6-809P lnc-UBE2U-2 ROR1
GH01J063980 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +46.9 46862 6.7 TCF7L2 ZSCAN21 RFX1 PRDM10 CTBP1 ZNF692 ZNF561 ZBTB20 SCRT2 ZSCAN5C lnc-UBE2U-2 RF00026-045 RNU6-809P ROR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-045 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00026-045 Gene

Genomic Locations for RF00026-045 Gene
chr1:64,028,894-64,029,000
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Genomic View for RF00026-045 Gene

Genes around RF00026-045 on UCSC Golden Path with GeneCards custom track

RF00026-045 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-045 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-045 Gene

Proteins for RF00026-045 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RF00026-045 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-045 Gene

Domains & Families for RF00026-045 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-045 Gene

Function for RF00026-045 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-045 Gene

Localization for RF00026-045 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-045 Gene

Pathways & Interactions for RF00026-045 Gene

PathCards logo

SuperPathways for RF00026-045 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-045 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00026-045 Gene

Drugs & Compounds for RF00026-045 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RF00026-045 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RF00026-045 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-045 Gene

No ASD Table

Relevant External Links for RF00026-045 Gene

GeneLoc Exon Structure for
RF00026-045

Expression for RF00026-045 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-045 Gene

Orthologs for RF00026-045 Gene

No data available for Orthologs and Evolution for RF00026-045 Gene

Paralogs for RF00026-045 Gene

No data available for Paralogs for RF00026-045 Gene

Variants for RF00026-045 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-045 Gene

Disorders for RF00026-045 Gene

No disorders were found for RF00026-045 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-045 Gene

Publications for RF00026-045 Gene

No publications were found for RF00026-045 Gene.

No data available for External Links for RF00026-045 Gene

Products for RF00026-045 Gene

Sources for RF00026-045 Gene