Aliases for RF00026-005 Gene

Data sources for RF00026-005 Gene:

RNA type for RF00026-005 Gene

snRNA

Aliases for RF00026-005 Gene

No data available for External Ids for RF00026-005 Gene

Summaries for RF00026-005 Gene

GeneCards Summary for RF00026-005 Gene

RF00026-005 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00026-005 Gene

Additional gene information for RF00026-005 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00026-005 Gene

Genomics for RF00026-005 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00026-005 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J010294 Enhancer 0.7 Ensembl dbSUPER 250.7 +1.0 1035 2 MAFF ZNF316 FOXA1 RFX5 SPI1 YY1 MLLT1 RF00026-005 RNU6-37P PGD piR-50199 KIF1B
GH01J010284 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -12.8 -12819 2.9 ZNF316 NFE2 MAFK NFE2L2 MAFG MAFF GATA2 CEBPB EMSY PGD KIF1B DFFA PEX14 UBE4B HSALNG0000756 RF00026-005 RNU6-37P
GH01J010291 Enhancer 0.6 Ensembl dbSUPER 0.4 -6.3 -6265 0.2 YY1 RAD21 ATF3 PGD RNU6-828P RF00026-005 RNU6-37P HSALNG0000756 KIF1B
GH01J010283 Enhancer 0.7 ENCODE 0.4 -15.2 -15206 0.9 TAL1 BHLHE40 BATF JUND ZNF362 NR2F1 TEAD4 MEIS2 DPF2 ARID1B KIF1B PGD RNU6-828P CENPS CORT DFFA PEX14 UBE4B HSALNG0000756 RF00026-005
GH01J010296 Enhancer 0.3 Ensembl dbSUPER 0.7 -3.2 -3165 0.4 PGD RF00026-005 RNU6-37P HSALNG0000756 KIF1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00026-005 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00026-005 Gene

Latest Assembly
chr1:10,298,966-10,299,072
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand

Genomic View for RF00026-005 Gene

Genes around RF00026-005 on UCSC Golden Path with GeneCards custom track
RF00026-005 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00026-005 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00026-005 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00026-005 Gene

Proteins for RF00026-005 Gene

Post-translational modifications for RF00026-005 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00026-005 Gene

Domains & Families for RF00026-005 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00026-005 Gene

Function for RF00026-005 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00026-005 Gene

Localization for RF00026-005 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00026-005 Gene

Pathways & Interactions for RF00026-005 Gene

PathCards logo

SuperPathways for RF00026-005 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00026-005 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00026-005 Gene

Drugs & Compounds for RF00026-005 Gene

No Compound Related Data Available

Transcripts for RF00026-005 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00026-005 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000418239_9606 snRNA 107 1

Rfam: RF00026,

URS0000532A91_9606 snRNA 87 1

ENA: AF114985.1:266..352:ncRNA,

URS0000E60BBB_9606 snRNA 86 1

PDBe: 6QW6_6,

URS000004A895_9606 snRNA 64 1

ENA: AY623052.1:486..549:ncRNA,

RF00026-005 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00026-005 Gene

No ASD Table

Relevant External Links for RF00026-005 Gene

GeneLoc Exon Structure for
RF00026-005

No data available for mRNA/cDNA for RF00026-005 Gene

Expression for RF00026-005 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00026-005 Gene

Orthologs for RF00026-005 Gene

No data available for Orthologs and Evolution for RF00026-005 Gene

Paralogs for RF00026-005 Gene

No data available for Paralogs for RF00026-005 Gene

Variants for RF00026-005 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00026-005 Gene

Disorders for RF00026-005 Gene

No disorders were found for RF00026-005 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00026-005 Gene

Publications for RF00026-005 Gene

No publications were found for RF00026-005 Gene.

No data available for Mastermind for RF00026-005 Gene

Products for RF00026-005 Gene

Sources for RF00026-005 Gene