RF00019-091 Gene (RNA Gene)

 

GC06M052979
GIFtS:
3
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Aliases for RF00019-091 Gene

Subcategory (RNA class) for RF00019-091 Gene

Y_RNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00019-091 Gene

No data available for External Ids for RF00019-091 Gene

Summaries for RF00019-091 Gene

GeneCards Summary for RF00019-091 Gene

RF00019-091 is an RNA Gene, and is affiliated with the Y_RNA class.

Rfam classification for RF00019-091 Gene

Additional gene information for RF00019-091 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00019-091 Gene

Genomics for RF00019-091 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RF00019-091 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J052992 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -15.6 -15646 4.6 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 LEF1 IKZF1 NFKBIZ KDM1A ENSG00000202198 GSTA4 MN298307 RN7SK X05490 EFHC1 MCM3 CILK1 GSTA3 RF00019-091
GH06J052975 Enhancer 0.7 Ensembl ENCODE 0.7 +2.8 2843 2.8 CTCF CEBPG SPI1 EBF1 FOSL2 ATF4 CEBPB ATF3 RAD21 GSTA9P CILK1 GSTA3 RF00019-091 FJ601678-063 GSTA4
GH06J052984 Enhancer 0.6 ENCODE 0.4 -5.2 -5223 0.2 IKZF2 ZNF24 EED DPF2 RUNX3 GABPA MEF2D RUNX1 IKZF1 SPI1 GSTA3 RF00019-091 GSTA4
GH06J052990 Enhancer 0.6 Ensembl 0.4 -11.9 -11946 2 RFX1 SMARCC1 NFE2 ZNF316 ZBTB17 JUND ZFHX2 KLF17 ATF3 FOS CILK1 GSTA4 RF00019-091 GSTA3
GH06J052986 Enhancer 0.2 Ensembl 0.4 -7.3 -7346 0.4 GSTA9P GSTA4 RF00019-091 GSTA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00019-091 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00019-091 Gene

Genomic Locations for RF00019-091 Gene
chr6:52,979,158-52,979,255
(GRCh38/hg38)
Size:
98 bases
Orientation:
Minus strand

Genomic View for RF00019-091 Gene

Genes around RF00019-091 on UCSC Golden Path with GeneCards custom track
RF00019-091 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00019-091 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00019-091 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00019-091 Gene

Proteins for RF00019-091 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RF00019-091 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00019-091 Gene

Domains & Families for RF00019-091 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00019-091 Gene

Function for RF00019-091 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RF00019-091 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00019-091 Gene

Localization for RF00019-091 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00019-091 Gene

Pathways & Interactions for RF00019-091 Gene

PathCards logo

SuperPathways for RF00019-091 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00019-091 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00019-091 Gene

Drugs & Compounds for RF00019-091 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RF00019-091 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00019-091 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000065477E_9606 Y_RNA 98 1

Rfam: RF00019,

RF00019-091 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00019-091 Gene

No ASD Table

Relevant External Links for RF00019-091 Gene

GeneLoc Exon Structure for
RF00019-091

No data available for mRNA/cDNA for RF00019-091 Gene

Expression for RF00019-091 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00019-091 Gene

Orthologs for RF00019-091 Gene

No data available for Orthologs and Evolution for RF00019-091 Gene

Paralogs for RF00019-091 Gene

No data available for Paralogs for RF00019-091 Gene

Variants for RF00019-091 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00019-091 Gene

Disorders for RF00019-091 Gene

No disorders were found for RF00019-091 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00019-091 Gene

Publications for RF00019-091 Gene

No publications were found for RF00019-091 Gene.

No data available for Mastermind for RF00019-091 Gene

Products for RF00019-091 Gene

Sources for RF00019-091 Gene