Aliases for RF00019-089 Gene

Subcategory (RNA class) for RF00019-089 Gene

Y_RNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00019-089 Gene

No data available for External Ids for RF00019-089 Gene

Summaries for RF00019-089 Gene

GeneCards Summary for RF00019-089 Gene

RF00019-089 is an RNA Gene, and is affiliated with the Y_RNA class.

Rfam classification for RF00019-089 Gene

Additional gene information for RF00019-089 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00019-089 Gene

Genomics for RF00019-089 Gene

GeneHancer (GH) Regulatory Elements for RF00019-089 Gene

Promoters and enhancers for RF00019-089 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J123510 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 -2.0 -1951 3.4 ZBTB40 EP300 SIN3A TCF12 ZNF300 POLR2G GTF2E2 PHF8 TEAD4 ZNF10 CSNK1G3 CEP120 HSALNG0044551 RF00019-089 lnc-CEP120-4 KRT8P33 SNX2 ENSG00000260686 PRDM6 KRT18P16
GH05J123508 Enhancer 0.2 Ensembl 500.7 +1.2 1236 0.6 ENSG00000279772 RF00019-089 lnc-CEP120-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00019-089 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00019-089 Gene

Genomic Locations for RF00019-089 Gene
chr5:123,510,436-123,510,537
(GRCh38/hg38)
Size:
102 bases
Orientation:
Minus strand

Genomic View for RF00019-089 Gene

Genes around RF00019-089 on UCSC Golden Path with GeneCards custom track

RF00019-089 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00019-089 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00019-089 Gene

Proteins for RF00019-089 Gene

Post-translational modifications for RF00019-089 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00019-089 Gene

Domains & Families for RF00019-089 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00019-089 Gene

Function for RF00019-089 Gene

Phenotypes From GWAS Catalog for RF00019-089 Gene

miRNA for RF00019-089 Gene

miRTarBase miRNAs that target RF00019-089

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00019-089 Gene

Localization for RF00019-089 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00019-089 Gene

Pathways & Interactions for RF00019-089 Gene

PathCards logo

SuperPathways for RF00019-089 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00019-089 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00019-089 Gene

Drugs & Compounds for RF00019-089 Gene

No Compound Related Data Available

Transcripts for RF00019-089 Gene

mRNA/cDNA for RF00019-089 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00019-089 Gene

No ASD Table

Relevant External Links for RF00019-089 Gene

GeneLoc Exon Structure for
RF00019-089

Expression for RF00019-089 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00019-089 Gene

Orthologs for RF00019-089 Gene

No data available for Orthologs and Evolution for RF00019-089 Gene

Paralogs for RF00019-089 Gene

No data available for Paralogs for RF00019-089 Gene

Variants for RF00019-089 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00019-089 Gene

Disorders for RF00019-089 Gene

No disorders were found for RF00019-089 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00019-089 Gene

Publications for RF00019-089 Gene

No publications were found for RF00019-089 Gene.

No data available for Mastermind for RF00019-089 Gene

Products for RF00019-089 Gene

Sources for RF00019-089 Gene