Aliases for RF00019-027 Gene

Subcategory (RNA class) for RF00019-027 Gene

Y_RNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00019-027 Gene

No data available for External Ids for RF00019-027 Gene

Summaries for RF00019-027 Gene

GeneCards Summary for RF00019-027 Gene

RF00019-027 is an RNA Gene, and is affiliated with the Y_RNA class.

Rfam classification for RF00019-027 Gene

Additional gene information for RF00019-027 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00019-027 Gene

Genomics for RF00019-027 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00019-027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J039786 Enhancer 0.7 Ensembl ENCODE 600.7 -0.6 -591 5.4 TEAD4 CTCF RAD21 MAFF MAFK NR2F2 ZFHX2 NR2F1 NANOG EGR2 RF00019-027 RNY4P14 COG6 lnc-LHFPL6-7 FOXO1
GH13J039775 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +7.6 7612 5 CEBPG CREB1 CTCF RELA GTF2F1 CEBPB RAD21 RELB JUND RUNX3 COG6 ENSG00000212553 RNY4P14 RF00019-027 piR-61101-149 FOXO1
GH13J039765 Enhancer 0.9 Ensembl ENCODE 0.4 +18.3 18328 2.8 CTCF ZNF629 ZIC2 RAD21 ZNF501 ZNF600 ZNF561 SCRT2 ZSCAN5C OSR2 COG6 NHLRC3 ENSG00000212553 RNY4P14 RF00019-027 piR-61101-149 FOXO1
GH13J039801 Enhancer 0.8 Ensembl ENCODE 0.4 -18.3 -18254 3.7 CREB1 RFX1 ATF7 ESR1 CTBP1 ZNF592 PKNOX1 DPF2 NFIB FOXA1 ENSG00000212553 COG6 lnc-LHFPL6-7 RNY4P14 RF00019-027 FOXO1
GH13J039773 Enhancer 0.5 Ensembl ENCODE 0.4 +11.3 11310 0.8 JUND ZNF660 COG6 RF00019-027 RNY4P14 piR-61101-149 FOXO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00019-027 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00019-027 Gene

Genomic Locations for RF00019-027 Gene
chr13:39,785,415-39,785,510
(GRCh38/hg38)
Size:
96 bases
Orientation:
Minus strand

Genomic View for RF00019-027 Gene

Genes around RF00019-027 on UCSC Golden Path with GeneCards custom track
RF00019-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00019-027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00019-027 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00019-027 Gene

Proteins for RF00019-027 Gene

Post-translational modifications for RF00019-027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00019-027 Gene

Domains & Families for RF00019-027 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00019-027 Gene

Function for RF00019-027 Gene

Phenotypes From GWAS Catalog for RF00019-027 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00019-027 Gene

Localization for RF00019-027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00019-027 Gene

Pathways & Interactions for RF00019-027 Gene

PathCards logo

SuperPathways for RF00019-027 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00019-027 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00019-027 Gene

Drugs & Compounds for RF00019-027 Gene

No Compound Related Data Available

Transcripts for RF00019-027 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00019-027 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000689904_9606 Y_RNA 96 1

Rfam: RF00019,

RF00019-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00019-027 Gene

No ASD Table

Relevant External Links for RF00019-027 Gene

GeneLoc Exon Structure for
RF00019-027

No data available for mRNA/cDNA for RF00019-027 Gene

Expression for RF00019-027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00019-027 Gene

Orthologs for RF00019-027 Gene

No data available for Orthologs and Evolution for RF00019-027 Gene

Paralogs for RF00019-027 Gene

No data available for Paralogs for RF00019-027 Gene

Variants for RF00019-027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00019-027 Gene

Disorders for RF00019-027 Gene

No disorders were found for RF00019-027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00019-027 Gene

Publications for RF00019-027 Gene

No publications were found for RF00019-027 Gene.

No data available for Mastermind for RF00019-027 Gene

Products for RF00019-027 Gene

Sources for RF00019-027 Gene