RF00017-7843 Gene (RNA Gene)

 

GC09P115276
GIFtS:
2
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Aliases for RF00017-7843 Gene

Data sources for RF00017-7843 Gene:

Subcategory (RNA class) for RF00017-7843 Gene

SRP_RNA

Aliases for RF00017-7843 Gene

Previous GeneCards Identifiers for RF00017-7843 Gene

  • GC09P114640
  • GC09P114653
  • GC09M113729

No data available for External Ids for RF00017-7843 Gene

Summaries for RF00017-7843 Gene

GeneCards Summary for RF00017-7843 Gene

RF00017-7843 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-7843 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-7843 Gene

Genomics for RF00017-7843 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RF00017-7843 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH09J114604 Enhancer 1.2 Ensembl ENCODE dbSUPER 250.7 -1.5 -1508 5.2 SP1 BCL11A TRIM22 IRF4 MAFF RXRA EBF1 RARA FOXA2 ZBTB33 RF00017-7843 WHRN TMEM268 TEX53 HSALNG0073908 RF00017-7842
GH09J114609 Enhancer 0.5 Ensembl 250.7 +2.0 1992 0.2 TRIM25 ZNF316 FOXA1 GMEB1 ZNF512 MTA2 EMSY ZNF207 HSALNG0073908 HSALNG0073910 RF00017-7843 TMEM268 TEX53 RF00017-7842
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-7843 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00017-7843 Gene

Latest Assembly
chr9:114,607,509-114,607,656
(GRCh38/hg38)
Size:
148 bases
Orientation:
Plus strand

Genomic View for RF00017-7843 Gene

Genes around RF00017-7843 on UCSC Golden Path with GeneCards custom track
RF00017-7843 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00017-7843 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-7843 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-7843 Gene

Proteins for RF00017-7843 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RF00017-7843 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-7843 Gene

Domains & Families for RF00017-7843 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-7843 Gene

Function for RF00017-7843 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-7843 Gene

Localization for RF00017-7843 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-7843 Gene

Pathways & Interactions for RF00017-7843 Gene

PathCards logo

SuperPathways for RF00017-7843 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-7843 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-7843 Gene

Drugs & Compounds for RF00017-7843 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for RF00017-7843 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00017-7843 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000954E45_9606 SRP_RNA 148 1

Rfam: RF00017,

RF00017-7843 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-7843 Gene

No ASD Table

Relevant External Links for RF00017-7843 Gene

GeneLoc Exon Structure for
RF00017-7843

No data available for mRNA/cDNA for RF00017-7843 Gene

Expression for RF00017-7843 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-7843 Gene

Orthologs for RF00017-7843 Gene

No data available for Orthologs and Evolution for RF00017-7843 Gene

Paralogs for RF00017-7843 Gene

No data available for Paralogs for RF00017-7843 Gene

Variants for RF00017-7843 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-7843 Gene

Disorders for RF00017-7843 Gene

No disorders were found for RF00017-7843 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-7843 Gene

Publications for RF00017-7843 Gene

No publications were found for RF00017-7843 Gene.

No data available for Mastermind for RF00017-7843 Gene

Products for RF00017-7843 Gene

Sources for RF00017-7843 Gene