Aliases for RF00017-7837 Gene

Subcategory (RNA class) for RF00017-7837 Gene

SRP_RNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00017-7837 Gene

Previous GeneCards Identifiers for RF00017-7837 Gene

  • GC09P114638
  • GC09P114822

No data available for External Ids for RF00017-7837 Gene

Summaries for RF00017-7837 Gene

GeneCards Summary for RF00017-7837 Gene

RF00017-7837 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-7837 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-7837 Gene

Genomics for RF00017-7837 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00017-7837 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J113343 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.8 762 1.6 PRDM10 ZNF629 ZNF692 PHF21A ZIC2 PKNOX1 PATZ1 REST HDAC1 SOX6 RF00017-7837 BSPRY HDHD3 WDR31 lnc-BSPRY-1
GH09J113345 Enhancer 0.2 ENCODE 600.7 -0.6 -573 0.2 RF00017-7837 BSPRY WDR31
GH09J113344 Enhancer 0.2 ENCODE 600.7 -0.3 -253 0.2 RF00017-7837 WDR31 BSPRY
GH09J113339 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +4.7 4662 1.8 BRCA1 SP1 HNRNPL GATAD2A PRDM10 REST ZNF629 TFE3 RFX1 SIX5 WDR31 lnc-BSPRY-1 PRPF4 CDC26 BSPRY RNF183 ALAD C9orf43 POLE3 HDHD3
GH09J113274 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.2 +69.1 69062 3 BRCA1 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 TFE3 RFX1 SIX5 PRPF4 CDC26 lnc-CDC26-1 piR-38539 WDR31 SLC31A2 RGS3 FKBP15 piR-57135-125 RNF183
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-7837 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00017-7837 Gene

Genomic Locations for RF00017-7837 Gene
chr9:112,960,500-113,344,763
(GRCh38/hg38)
Size:
384,264 bases
Orientation:
Minus strand

Genomic View for RF00017-7837 Gene

Genes around RF00017-7837 on UCSC Golden Path with GeneCards custom track
RF00017-7837 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00017-7837 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-7837 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-7837 Gene

Proteins for RF00017-7837 Gene

Post-translational modifications for RF00017-7837 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-7837 Gene

Domains & Families for RF00017-7837 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-7837 Gene

Function for RF00017-7837 Gene

Phenotypes From GWAS Catalog for RF00017-7837 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-7837 Gene

Localization for RF00017-7837 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-7837 Gene

Pathways & Interactions for RF00017-7837 Gene

PathCards logo

SuperPathways for RF00017-7837 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-7837 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-7837 Gene

Drugs & Compounds for RF00017-7837 Gene

No Compound Related Data Available

Transcripts for RF00017-7837 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00017-7837 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000954994_9606 SRP_RNA 117 1

Rfam: RF00017,

RF00017-7837 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-7837 Gene

No ASD Table

Relevant External Links for RF00017-7837 Gene

GeneLoc Exon Structure for
RF00017-7837

No data available for mRNA/cDNA for RF00017-7837 Gene

Expression for RF00017-7837 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-7837 Gene

Orthologs for RF00017-7837 Gene

No data available for Orthologs and Evolution for RF00017-7837 Gene

Paralogs for RF00017-7837 Gene

No data available for Paralogs for RF00017-7837 Gene

Variants for RF00017-7837 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-7837 Gene

Disorders for RF00017-7837 Gene

No disorders were found for RF00017-7837 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-7837 Gene

Publications for RF00017-7837 Gene

No publications were found for RF00017-7837 Gene.

No data available for Mastermind for RF00017-7837 Gene

Products for RF00017-7837 Gene

Sources for RF00017-7837 Gene