Aliases for RF00017-7835 Gene

Subcategory (RNA class) for RF00017-7835 Gene

SRP_RNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00017-7835 Gene

Previous GeneCards Identifiers for RF00017-7835 Gene

  • GC09M112961

No data available for External Ids for RF00017-7835 Gene

Summaries for RF00017-7835 Gene

GeneCards Summary for RF00017-7835 Gene

RF00017-7835 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-7835 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-7835 Gene

Genomics for RF00017-7835 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00017-7835 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J112763 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 +1.1 1098 2 GATAD2A TFE3 IKZF1 RXRB SP1 HDAC1 GTF2F1 TOE1 CEBPA KMT2B RF00017-7835 INIP SLC46A2 ENSG00000226609 SNX30 piR-52680-369
GH09J112761 Enhancer 0.4 dbSUPER 600.7 -1.3 -1297 1.5 FOXA1 CEBPB FOS BHLHE40 RF00017-7835 piR-57134-114 INIP ENSG00000226609 SNX30 ENSG00000271631 SLC46A2
GH09J112771 Enhancer 0.8 Ensembl ENCODE 0.4 +9.2 9198 4.2 ZNF7 FOXA1 SCRT2 RUNX3 NFE2 CEBPB NR2F2 ZNF318 GATA3 SPI1 ENSG00000226609 SNX30 INIP RF00017-7835 piR-52680-369 SLC46A2
GH09J112783 Enhancer 0.9 Ensembl ENCODE 0.4 +20.3 20301 2 CREB1 TEAD4 PRDM10 ZNF629 RFX5 KDM1A ZNF501 ATF7 SP1 ZXDB SNX30 ENSG00000226609 INIP SLC46A2 piR-52680-369 RF00017-7835
GH09J112793 Enhancer 0.9 Ensembl ENCODE 0.3 +29.2 29201 1.4 CTCF PRDM10 ZNF143 PRDM1 REST RAD21 TRIM22 SMARCA5 CTBP1 RUNX3 ENSG00000226609 SNX30 INIP C9orf147 KIAA1958 piR-52680-369 RF00017-7835 SLC46A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-7835 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00017-7835 Gene

Genomic Locations for RF00017-7835 Gene
chr9:112,763,703-112,763,848
(GRCh38/hg38)
Size:
146 bases
Orientation:
Plus strand

Genomic View for RF00017-7835 Gene

Genes around RF00017-7835 on UCSC Golden Path with GeneCards custom track
RF00017-7835 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00017-7835 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-7835 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-7835 Gene

Proteins for RF00017-7835 Gene

Post-translational modifications for RF00017-7835 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-7835 Gene

Domains & Families for RF00017-7835 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-7835 Gene

Function for RF00017-7835 Gene

Phenotypes From GWAS Catalog for RF00017-7835 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-7835 Gene

Localization for RF00017-7835 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-7835 Gene

Pathways & Interactions for RF00017-7835 Gene

PathCards logo

SuperPathways for RF00017-7835 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-7835 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-7835 Gene

Drugs & Compounds for RF00017-7835 Gene

No Compound Related Data Available

Transcripts for RF00017-7835 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00017-7835 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000956976_9606 SRP_RNA 146 1

Rfam: RF00017,

RF00017-7835 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-7835 Gene

No ASD Table

Relevant External Links for RF00017-7835 Gene

GeneLoc Exon Structure for
RF00017-7835

No data available for mRNA/cDNA for RF00017-7835 Gene

Expression for RF00017-7835 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-7835 Gene

Orthologs for RF00017-7835 Gene

No data available for Orthologs and Evolution for RF00017-7835 Gene

Paralogs for RF00017-7835 Gene

No data available for Paralogs for RF00017-7835 Gene

Variants for RF00017-7835 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-7835 Gene

Disorders for RF00017-7835 Gene

No disorders were found for RF00017-7835 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-7835 Gene

Publications for RF00017-7835 Gene

No publications were found for RF00017-7835 Gene.

No data available for Mastermind for RF00017-7835 Gene

Products for RF00017-7835 Gene

Sources for RF00017-7835 Gene