Aliases for RF00017-7012 Gene

Subcategory (RNA class) for RF00017-7012 Gene

SRP_RNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00017-7012 Gene

No data available for External Ids for RF00017-7012 Gene

Summaries for RF00017-7012 Gene

GeneCards Summary for RF00017-7012 Gene

RF00017-7012 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-7012 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-7012 Gene

Genomics for RF00017-7012 Gene

GeneHancer (GH) Regulatory Elements for RF00017-7012 Gene

Promoters and enhancers for RF00017-7012 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J042587 Enhancer 0.8 Ensembl ENCODE 500.7 +1.4 1389 1 FOS BCL11A BATF MAFK IRF4 POU2F2 JUNB TCF7 USF2 HMBOX1 RF00017-7012 piR-48759-300 SMIM19 ENSG00000254165 SLC20A2 RF00017-7008
GH08J042596 Enhancer 0.8 Ensembl ENCODE 0.4 +9.5 9485 0.8 NCOR1 SKI ZBTB33 ZNF205 SMAD4 BCL6 RXRA RARA MAX KDM1A piR-43107-285 SMIM19 piR-35564-135 RF00017-7012 RF00017-7008
GH08J042659 Enhancer 1 Ensembl ENCODE 0.2 +74.2 74150 2.3 EP300 NCOR1 KDM6A TCF7 SKI TEAD1 NR2F2 FOXA2 ZNF316 USF1 RF00017-7008 RF00017-7014 RF00017-7012
GH08J042658 Enhancer 0.8 Ensembl 0.2 +71.9 71884 1.2 FOXK2 ZIC2 KDM6A TCF7 SKI KMT2B FOXA2 ZNF316 MAFF KAT7 SLC20A2 RF00017-7008 RF00017-7014 RF00017-7012
GH08J042642 Enhancer 0.6 Ensembl CraniofacialAtlas 0.2 +55.9 55885 1.2 ZIC2 GLIS1 NR2F6 ESR1 RF00017-7008 piR-35564-135 RF00017-7012
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-7012 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00017-7012 Gene

Genomic Locations for RF00017-7012 Gene
chr8:42,586,716-42,911,287
(GRCh38/hg38)
Size:
324,572 bases
Orientation:
Plus strand

Genomic View for RF00017-7012 Gene

Genes around RF00017-7012 on UCSC Golden Path with GeneCards custom track

RF00017-7012 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-7012 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-7012 Gene

Proteins for RF00017-7012 Gene

Post-translational modifications for RF00017-7012 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-7012 Gene

Domains & Families for RF00017-7012 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-7012 Gene

Function for RF00017-7012 Gene

Phenotypes From GWAS Catalog for RF00017-7012 Gene

miRNA for RF00017-7012 Gene

miRTarBase miRNAs that target RF00017-7012

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00017-7012 Gene

Localization for RF00017-7012 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-7012 Gene

Pathways & Interactions for RF00017-7012 Gene

PathCards logo

SuperPathways for RF00017-7012 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00017-7012 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-7012 Gene

Drugs & Compounds for RF00017-7012 Gene

No Compound Related Data Available

Transcripts for RF00017-7012 Gene

mRNA/cDNA for RF00017-7012 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-7012 Gene

No ASD Table

Relevant External Links for RF00017-7012 Gene

GeneLoc Exon Structure for
RF00017-7012

Expression for RF00017-7012 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-7012 Gene

Orthologs for RF00017-7012 Gene

No data available for Orthologs and Evolution for RF00017-7012 Gene

Paralogs for RF00017-7012 Gene

No data available for Paralogs for RF00017-7012 Gene

Variants for RF00017-7012 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-7012 Gene

Disorders for RF00017-7012 Gene

No disorders were found for RF00017-7012 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-7012 Gene

Publications for RF00017-7012 Gene

No publications were found for RF00017-7012 Gene.

No data available for Mastermind for RF00017-7012 Gene

Products for RF00017-7012 Gene

Sources for RF00017-7012 Gene