Aliases for RF00017-5432 Gene

Subcategory (RNA class) for RF00017-5432 Gene

SRP_RNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00017-5432 Gene

Previous GeneCards Identifiers for RF00017-5432 Gene

  • GC06P033356

No data available for External Ids for RF00017-5432 Gene

Summaries for RF00017-5432 Gene

GeneCards Summary for RF00017-5432 Gene

RF00017-5432 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-5432 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-5432 Gene

Genomics for RF00017-5432 Gene

GeneHancer (GH) Regulatory Elements for RF00017-5432 Gene

Promoters and enhancers for RF00017-5432 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033339 Enhancer 0.4 Ensembl 500.7 +1.5 1464 0.4 SPI1 SCRT1 IKZF1 SCRT2 MYL8P RF00017-5432 TAPBP ZBTB22 RGL2 PFDN6 WDR46 RPL35AP4 KIFC1 PHF1
GH06J033341 Enhancer 1.2 FANTOM5 ENCODE 0.4 +5.8 5835 4 CTCF NRF1 ZIC2 AFF1 ZBTB26 REST HES1 KLF7 ZNF740 MYC piR-57133-513 DAXX TAPBP WDR46 PHF1 KIFC1 BRD2 LEMD2 RGL2 ZBTB22
GH06J033390 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 0.2 +54.5 54495 4.5 FOXK2 ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 POLR2G USF1 SP1 ENSG00000056678-001 KIFC1 DAXX RPS18 WDR46 BRD2 ITPR3 HLA-DOB HLA-DOA PSMB8
GH06J033414 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 +80.1 80121 7.5 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 POLR2G USF1 CUTA SYNGAP1 lnc-DAXX-2 LEMD2 BRD2 VPS52 WDR46 DAXX ITPR3 RGL2
GH06J033409 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 +72.9 72924 4.1 HNRNPK SIN3A NRF1 TCF12 POLR2G SP1 NCOR1 ZNF639 ZIC2 POLR2A ENSG00000239756-001 PHF1 DAXX BRD2 LEMD2 WDR46 RXRB VPS52 RGL2 HCG25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-5432 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00017-5432 Gene

Genomic Locations for RF00017-5432 Gene
chr6:33,338,137-33,725,228
(GRCh38/hg38)
Size:
387,092 bases
Orientation:
Plus strand

Genomic View for RF00017-5432 Gene

Genes around RF00017-5432 on UCSC Golden Path with GeneCards custom track

RF00017-5432 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-5432 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-5432 Gene

Proteins for RF00017-5432 Gene

Post-translational modifications for RF00017-5432 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-5432 Gene

Domains & Families for RF00017-5432 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-5432 Gene

Function for RF00017-5432 Gene

Phenotypes From GWAS Catalog for RF00017-5432 Gene

miRNA for RF00017-5432 Gene

miRTarBase miRNAs that target RF00017-5432

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00017-5432 Gene

Localization for RF00017-5432 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-5432 Gene

Pathways & Interactions for RF00017-5432 Gene

PathCards logo

SuperPathways for RF00017-5432 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00017-5432 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-5432 Gene

Drugs & Compounds for RF00017-5432 Gene

No Compound Related Data Available

Transcripts for RF00017-5432 Gene

mRNA/cDNA for RF00017-5432 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-5432 Gene

No ASD Table

Relevant External Links for RF00017-5432 Gene

GeneLoc Exon Structure for
RF00017-5432

Expression for RF00017-5432 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-5432 Gene

Orthologs for RF00017-5432 Gene

No data available for Orthologs and Evolution for RF00017-5432 Gene

Paralogs for RF00017-5432 Gene

No data available for Paralogs for RF00017-5432 Gene

Variants for RF00017-5432 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-5432 Gene

Disorders for RF00017-5432 Gene

No disorders were found for RF00017-5432 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-5432 Gene

Publications for RF00017-5432 Gene

No publications were found for RF00017-5432 Gene.

No data available for Mastermind for RF00017-5432 Gene

Products for RF00017-5432 Gene

Sources for RF00017-5432 Gene