Aliases for RF00017-5432 Gene

Data sources for RF00017-5432 Gene:

RNA type for RF00017-5432 Gene

SRP_RNA

Aliases for RF00017-5432 Gene

Previous GeneCards Identifiers for RF00017-5432 Gene

  • GC06P033356
  • GC06P033554
  • GC06P047387
  • GC06P049433

No data available for External Ids for RF00017-5432 Gene

Summaries for RF00017-5432 Gene

GeneCards Summary for RF00017-5432 Gene

RF00017-5432 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-5432 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-5432 Gene

Genomics for RF00017-5432 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00017-5432 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J169278 Enhancer 0.2 Ensembl 250.7 +0.3 334 0.4 RF00017-5432 HSALNG0055338 RF00994-974 THBS2 LOC105378148
GH06J169266 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.4 +9.6 9634 7.8 ATF4 ATF2 BHLHE40 ATF3 EP300 ATF7 ZNF157 LINC02544 ENSG00000266896 RF00017-5432 HSALNG0055338 RF00994-974 THBS2 LOC105378148
GH06J169263 Enhancer 0.5 Ensembl ENCODE 0.4 +14.6 14635 1.4 ZNF10 EP300 ENSG00000226445 RF00994-974 HSALNG0055338 THBS2 RF00017-5432 LOC105378148
GH06J169274 Enhancer 0.2 Ensembl 0.7 +3.8 3834 0.6 RF00017-5432 HSALNG0055338 RF00994-974 THBS2 LOC105378148
GH06J169281 Enhancer 0.2 Ensembl 0.7 -2.7 -2666 0.4 RF00017-5432 ENSG00000233085 HSALNG0055338 THBS2 LOC105378148
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-5432 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00017-5432 Gene

Latest Assembly
chr6:169,278,588-169,278,735
(GRCh38/hg38)
Size:
148 bases
Orientation:
Minus strand

Genomic View for RF00017-5432 Gene

Genes around RF00017-5432 on UCSC Golden Path with GeneCards custom track
RF00017-5432 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00017-5432 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-5432 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-5432 Gene

Proteins for RF00017-5432 Gene

Post-translational modifications for RF00017-5432 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-5432 Gene

Domains & Families for RF00017-5432 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-5432 Gene

Function for RF00017-5432 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-5432 Gene

Localization for RF00017-5432 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-5432 Gene

Pathways & Interactions for RF00017-5432 Gene

PathCards logo

SuperPathways for RF00017-5432 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-5432 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-5432 Gene

Drugs & Compounds for RF00017-5432 Gene

No Compound Related Data Available

Transcripts for RF00017-5432 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00017-5432 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000906792_9606 SRP_RNA 148 1

Rfam: RF00017,

RF00017-5432 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-5432 Gene

No ASD Table

Relevant External Links for RF00017-5432 Gene

GeneLoc Exon Structure for
RF00017-5432

No data available for mRNA/cDNA for RF00017-5432 Gene

Expression for RF00017-5432 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-5432 Gene

Orthologs for RF00017-5432 Gene

No data available for Orthologs and Evolution for RF00017-5432 Gene

Paralogs for RF00017-5432 Gene

No data available for Paralogs for RF00017-5432 Gene

Variants for RF00017-5432 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-5432 Gene

Disorders for RF00017-5432 Gene

No disorders were found for RF00017-5432 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-5432 Gene

Publications for RF00017-5432 Gene

No publications were found for RF00017-5432 Gene.

No data available for Mastermind for RF00017-5432 Gene

Products for RF00017-5432 Gene

Sources for RF00017-5432 Gene