Aliases for RF00017-5091 Gene

Subcategory (RNA class) for RF00017-5091 Gene

SRP_RNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00017-5091 Gene

No data available for External Ids for RF00017-5091 Gene

Summaries for RF00017-5091 Gene

GeneCards Summary for RF00017-5091 Gene

RF00017-5091 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-5091 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-5091 Gene

Genomics for RF00017-5091 Gene

GeneHancer (GH) Regulatory Elements for RF00017-5091 Gene

Promoters and enhancers for RF00017-5091 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J171567 Enhancer 0.3 Ensembl 500.7 -1.2 -1225 1 ZBTB40 HSALNG0046570 RF00017-5091 SMIM23 LOC105377722
GH05J171534 Enhancer 0.8 Ensembl 0.3 +31.1 31076 2.4 EP300 CTBP1 LEF1 NCOR1 ZNF316 ARNT MAFF CREB3L1 TRIM24 MAFK FGF18 SMIM23 RF00017-5095 RF00017-5091 piR-41306-222
GH05J171493 Enhancer 1.2 ENCODE CraniofacialAtlas 0.2 +71.4 71402 2.7 BCLAF1 GTF2E2 JUND FOS ZNF639 ZIC2 TARDBP DNMT1 REST MYC LOC105377720 LOC105377721 lnc-FGF18-4 RF00017-5093 RF00017-5091
GH05J171519 Enhancer 0.8 ENCODE CraniofacialAtlas 0.3 +45.1 45145 2.9 CTCF JUND FOS TEAD4 ZIC2 CTBP1 HDAC2 POLR2A NR3C1 FOSL2 piR-41306-222 RF00017-5095 RF00017-5091
GH05J171524 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.3 +41.5 41536 1.5 MXI1 RCOR1 CHD2 GATA2 piR-41306-222 RF00017-5095 RF00017-5091
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-5091 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00017-5091 Gene

Genomic Locations for RF00017-5091 Gene
chr5:171,222,811-171,566,276
(GRCh38/hg38)
Size:
343,466 bases
Orientation:
Minus strand

Genomic View for RF00017-5091 Gene

Genes around RF00017-5091 on UCSC Golden Path with GeneCards custom track

RF00017-5091 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-5091 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-5091 Gene

Proteins for RF00017-5091 Gene

Post-translational modifications for RF00017-5091 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-5091 Gene

Domains & Families for RF00017-5091 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-5091 Gene

Function for RF00017-5091 Gene

Phenotypes From GWAS Catalog for RF00017-5091 Gene

miRNA for RF00017-5091 Gene

miRTarBase miRNAs that target RF00017-5091

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00017-5091 Gene

Localization for RF00017-5091 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-5091 Gene

Pathways & Interactions for RF00017-5091 Gene

PathCards logo

SuperPathways for RF00017-5091 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00017-5091 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00017-5091 Gene

Drugs & Compounds for RF00017-5091 Gene

No Compound Related Data Available

Transcripts for RF00017-5091 Gene

mRNA/cDNA for RF00017-5091 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-5091 Gene

No ASD Table

Relevant External Links for RF00017-5091 Gene

GeneLoc Exon Structure for
RF00017-5091

Expression for RF00017-5091 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-5091 Gene

Orthologs for RF00017-5091 Gene

No data available for Orthologs and Evolution for RF00017-5091 Gene

Paralogs for RF00017-5091 Gene

No data available for Paralogs for RF00017-5091 Gene

Variants for RF00017-5091 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-5091 Gene

Disorders for RF00017-5091 Gene

No disorders were found for RF00017-5091 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-5091 Gene

Publications for RF00017-5091 Gene

No publications were found for RF00017-5091 Gene.

No data available for Mastermind for RF00017-5091 Gene

Products for RF00017-5091 Gene

Sources for RF00017-5091 Gene