Aliases for RF00017-2557 Gene

Subcategory (RNA class) for RF00017-2557 Gene

SRP_RNA

Quality Score for this RNA gene is

11

Aliases for RF00017-2557 Gene

No data available for External Ids for RF00017-2557 Gene

Summaries for RF00017-2557 Gene

GeneCards Summary for RF00017-2557 Gene

RF00017-2557 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-2557 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-2557 Gene

Genomics for RF00017-2557 Gene

GeneHancer (GH) Regulatory Elements for RF00017-2557 Gene

Promoters and enhancers for RF00017-2557 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J076375 Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +1.4 1420 4.5 LCORL MLX RBPJ NR2F1 ATF1 NR2F6 CREB1 MIXL1 NFYC HLF SPHK1 RF00017-2557 QRICH2 PRPSAP1 JMJD6 AANAT ITGB4 RHBDF2 TEN1
GH17J076368 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -5.1 -5101 5.8 CTCF ZNF362 L3MBTL2 ZNF384 MAFK CEBPG IKZF1 ZIC2 POLR2A CEBPA SPHK1 QRICH2 PRPSAP1 RF00017-2557 piR-38717-005
GH17J076361 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.7 -13740 2.4 NR2F6 ELF3 MLLT1 CEBPG KAT8 DPF2 ZIC2 CEBPA RFX1 SOX13 SPHK1 PRPSAP1 RHBDF2 piR-38717-005 RF00017-2557
GH17J076365 Enhancer 0.8 Ensembl ENCODE 0.4 -10.2 -10213 0.9 CTCF ZBTB6 RAD21 ZNF384 REST ZBTB26 ZBTB17 SMC3 FOXA2 SKIL SPHK1 QRICH2 PRPSAP1 piR-38717-005 RF00017-2557
GH17J076359 Enhancer 0.7 Ensembl dbSUPER 0.4 -15.7 -15739 0.4 HLF ZNF121 ZNF316 MAFK ZNF48 EMSY piR-38717-005 RF00017-2557 PRPSAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-2557 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00017-2557 Gene

Genomic Locations for RF00017-2557 Gene
chr17:76,376,140-76,376,287
(GRCh38/hg38)
Size:
148 bases
Orientation:
Plus strand

Genomic View for RF00017-2557 Gene

Genes around RF00017-2557 on UCSC Golden Path with GeneCards custom track

RF00017-2557 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-2557 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-2557 Gene

Proteins for RF00017-2557 Gene

Post-translational modifications for RF00017-2557 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-2557 Gene

Domains & Families for RF00017-2557 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-2557 Gene

Function for RF00017-2557 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-2557 Gene

Localization for RF00017-2557 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-2557 Gene

Pathways & Interactions for RF00017-2557 Gene

PathCards logo

SuperPathways for RF00017-2557 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-2557 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00017-2557 Gene

Drugs & Compounds for RF00017-2557 Gene

No Compound Related Data Available

Transcripts for RF00017-2557 Gene

mRNA/cDNA for RF00017-2557 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-2557 Gene

No ASD Table

Relevant External Links for RF00017-2557 Gene

GeneLoc Exon Structure for
RF00017-2557

Expression for RF00017-2557 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-2557 Gene

Orthologs for RF00017-2557 Gene

No data available for Orthologs and Evolution for RF00017-2557 Gene

Paralogs for RF00017-2557 Gene

No data available for Paralogs for RF00017-2557 Gene

Variants for RF00017-2557 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-2557 Gene

Disorders for RF00017-2557 Gene

No disorders were found for RF00017-2557 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-2557 Gene

Publications for RF00017-2557 Gene

No publications were found for RF00017-2557 Gene.

No data available for External Links for RF00017-2557 Gene

Products for RF00017-2557 Gene

Sources for RF00017-2557 Gene