RF00017-2367 Gene (RNA Gene)

 

GC17M038833
GIFtS:
2

Aliases for RF00017-2367 Gene

Subcategory (RNA class) for RF00017-2367 Gene

SRP_RNA

Quality Score for this RNA gene is

11

Aliases for RF00017-2367 Gene

No data available for External Ids for RF00017-2367 Gene

Summaries for RF00017-2367 Gene

GeneCards Summary for RF00017-2367 Gene

RF00017-2367 is an RNA Gene, and is affiliated with the SRP_RNA class.

Additional gene information for RF00017-2367 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RF00017-2367 Gene

Genomics for RF00017-2367 Gene

GeneHancer (GH) Regulatory Elements for RF00017-2367 Gene

Promoters and enhancers for RF00017-2367 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J038823 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -5.8 -5836 3.2 E2F8 SIN3A SP1 ZBTB40 SIX5 MLX RBPJ POLR2A NR2F1 NR2F6 CWC25 MIR4727 MED1 CDK12 LOC105371762 SNORA21 RPL23 RPL19 PIP4K2B FBXL20
GH17J038815 Enhancer 0.5 ENCODE 0.6 +3.1 3099 0.9 MAFK PRDM1 CEBPB RUNX3 CTCF C17orf98 PSMB3 RF00017-2367 CWC25 lnc-PIP4K2B-2
GH17J038811 Enhancer 0.3 Ensembl ENCODE 0.4 +7.4 7392 0.8 lnc-PIP4K2B-2 CWC25 PIP4K2B RF00017-2367
GH17J038814 Enhancer 0.2 Ensembl 0.6 +4.4 4385 0.4 C17orf98 PSMB3 RF00017-2367 lnc-PIP4K2B-2 CWC25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00017-2367 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00017-2367 Gene

Genomic Locations for RF00017-2367 Gene
chr17:38,819,040-38,819,186
(GRCh38/hg38)
Size:
147 bases
Orientation:
Minus strand

Genomic View for RF00017-2367 Gene

Genes around RF00017-2367 on UCSC Golden Path with GeneCards custom track

RF00017-2367 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00017-2367 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00017-2367 Gene

Proteins for RF00017-2367 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RF00017-2367 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00017-2367 Gene

Domains & Families for RF00017-2367 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00017-2367 Gene

Function for RF00017-2367 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RF00017-2367 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00017-2367 Gene

Localization for RF00017-2367 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00017-2367 Gene

Pathways & Interactions for RF00017-2367 Gene

PathCards logo

SuperPathways for RF00017-2367 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00017-2367 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00017-2367 Gene

Drugs & Compounds for RF00017-2367 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RF00017-2367 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RF00017-2367 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00017-2367 Gene

No ASD Table

Relevant External Links for RF00017-2367 Gene

GeneLoc Exon Structure for
RF00017-2367

Expression for RF00017-2367 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00017-2367 Gene

Orthologs for RF00017-2367 Gene

No data available for Orthologs and Evolution for RF00017-2367 Gene

Paralogs for RF00017-2367 Gene

No data available for Paralogs for RF00017-2367 Gene

Variants for RF00017-2367 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00017-2367 Gene

Disorders for RF00017-2367 Gene

No disorders were found for RF00017-2367 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00017-2367 Gene

Publications for RF00017-2367 Gene

No publications were found for RF00017-2367 Gene.

No data available for External Links for RF00017-2367 Gene

Products for RF00017-2367 Gene

Sources for RF00017-2367 Gene