Aliases for RF00004-042 Gene

Subcategory (RNA class) for RF00004-042 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00004-042 Gene

No data available for External Ids for RF00004-042 Gene

Summaries for RF00004-042 Gene

GeneCards Summary for RF00004-042 Gene

RF00004-042 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00004-042 Gene

Additional gene information for RF00004-042 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00004-042 Gene

Genomics for RF00004-042 Gene

GeneHancer (GH) Regulatory Elements for RF00004-042 Gene

Promoters and enhancers for RF00004-042 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J065130 Enhancer 0.8 Ensembl ENCODE 0.4 -7.7 -7669 4.2 FOXA2 SAP130 JUND GATA3 FOXP1 ZNF335 ADNP ETV1 DPF2 ETV4 MAX ENSG00000259118 RAB15 CHURC1 RNU2-14P RF00004-042 HSALNG0101944
GH14J065118 Enhancer 0.8 Ensembl ENCODE 0.4 +6.2 6241 0.6 ZNF217 CUX1 GATAD2B CTBP1 ESRRA NR3C1 ESR1 GATA3 MYC DPF2 RNU2-14P RF00004-042 lnc-FNTB-6
GH14J065106 Enhancer 0.8 ENCODE 0.4 +17.2 17243 0.8 PHB2 ZBTB11 HES1 MYC HDAC3 NCOR1 ZNF316 NFIC ARNT MYNN MAX RAB15 lnc-FNTB-6 RF00004-042 RNU2-14P
GH14J065159 Enhancer 0.8 Ensembl ENCODE 0.3 -35.4 -35355 1 RELA BCL11A TCF12 POU2F2 ATF2 JUNB PBX3 PAX5 NFIC TBL1XR1 HSALNG0101944 piR-51137-041 RF00004-042 RNU2-14P
GH14J065137 Enhancer 0.5 Ensembl 0.4 -13.4 -13359 0.2 TRIM28 ZNF341 ZNF335 ZNF189 PRDM6 FEZF1 PRDM10 MZF1 RNU2-14P RF00004-042 HSALNG0101944
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00004-042 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00004-042 Gene

Genomic Locations for RF00004-042 Gene
chr14:65,124,353-65,124,542
(GRCh38/hg38)
Size:
190 bases
Orientation:
Minus strand

Genomic View for RF00004-042 Gene

Genes around RF00004-042 on UCSC Golden Path with GeneCards custom track

RF00004-042 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00004-042 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00004-042 Gene

Proteins for RF00004-042 Gene

Post-translational modifications for RF00004-042 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00004-042 Gene

Domains & Families for RF00004-042 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00004-042 Gene

Function for RF00004-042 Gene

miRNA for RF00004-042 Gene

miRTarBase miRNAs that target RF00004-042

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00004-042 Gene

Localization for RF00004-042 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00004-042 Gene

Pathways & Interactions for RF00004-042 Gene

PathCards logo

SuperPathways for RF00004-042 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00004-042 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00004-042 Gene

Drugs & Compounds for RF00004-042 Gene

No Compound Related Data Available

Transcripts for RF00004-042 Gene

mRNA/cDNA for RF00004-042 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00004-042 Gene

No ASD Table

Relevant External Links for RF00004-042 Gene

GeneLoc Exon Structure for
RF00004-042

Expression for RF00004-042 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00004-042 Gene

Orthologs for RF00004-042 Gene

No data available for Orthologs and Evolution for RF00004-042 Gene

Paralogs for RF00004-042 Gene

No data available for Paralogs for RF00004-042 Gene

Variants for RF00004-042 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00004-042 Gene

Disorders for RF00004-042 Gene

No disorders were found for RF00004-042 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00004-042 Gene

Publications for RF00004-042 Gene

No publications were found for RF00004-042 Gene.

No data available for Mastermind for RF00004-042 Gene

Products for RF00004-042 Gene

Sources for RF00004-042 Gene