Aliases for RF00003-086 Gene

Subcategory (RNA class) for RF00003-086 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00003-086 Gene

Previous GeneCards Identifiers for RF00003-086 Gene

  • GC06M145464

No data available for External Ids for RF00003-086 Gene

Summaries for RF00003-086 Gene

GeneCards Summary for RF00003-086 Gene

RF00003-086 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00003-086 Gene

Additional gene information for RF00003-086 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00003-086 Gene

Genomics for RF00003-086 Gene

GeneHancer (GH) Regulatory Elements for RF00003-086 Gene

Promoters and enhancers for RF00003-086 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J043073 Enhancer 0.5 ENCODE 500.7 +0.2 249 0.2 CTCF TRIM22 ZNF384 SMC3 RAD21 ZNF143 YY1 RF00003-086 RNU1-124P HOOK3 piR-33804-120 FNTA ENSG00000254673 RF00017-7018
GH08J043054 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -16.3 -16295 5.2 HNRNPK ZBTB40 ZNF217 EP300 ZSCAN5C SIN3A NRF1 TCF12 POLR2G USF1 FNTA HGSNAT ENSG00000254165 IKBKB HOOK3 ENSG00000254673 ENSG00000254198 RNF170 POMK THAP1
GH08J043050 Enhancer 0.9 Ensembl ENCODE 0.4 -22.4 -22422 0.9 NCOR1 FOXA1 SKI TBX3 OSR2 FOXA2 ESR1 HDAC1 CREM GATA3 FNTA RF00017-7020 RF00003-086 RNU1-124P ENSG00000254673 RF00017-7018
GH08J043082 Enhancer 0.6 Ensembl 0.4 +8.3 8327 0.8 TRIM28 OSR2 FOXA2 ZNF263 ZNF189 ZNF843 ZNF664 RXRA HNF4A ZBTB12 FNTA RNU1-124P RF00003-086 piR-33804-120 RF00017-7018
GH08J043069 Promoter 0.3 EPDnew 0.7 -3.9 -3888 0.1 FNTA RF00003-086 RNU1-124P RF00017-7020 ENSG00000254673 RF00017-7018
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00003-086 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00003-086 Gene

Genomic Locations for RF00003-086 Gene
chr8:43,073,474-43,073,618
(GRCh38/hg38)
Size:
145 bases
Orientation:
Plus strand

Genomic View for RF00003-086 Gene

Genes around RF00003-086 on UCSC Golden Path with GeneCards custom track

RF00003-086 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00003-086 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00003-086 Gene

Proteins for RF00003-086 Gene

Post-translational modifications for RF00003-086 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00003-086 Gene

Domains & Families for RF00003-086 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00003-086 Gene

Function for RF00003-086 Gene

miRNA for RF00003-086 Gene

miRTarBase miRNAs that target RF00003-086

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00003-086 Gene

Localization for RF00003-086 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00003-086 Gene

Pathways & Interactions for RF00003-086 Gene

PathCards logo

SuperPathways for RF00003-086 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00003-086 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00003-086 Gene

Drugs & Compounds for RF00003-086 Gene

No Compound Related Data Available

Transcripts for RF00003-086 Gene

mRNA/cDNA for RF00003-086 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00003-086 Gene

No ASD Table

Relevant External Links for RF00003-086 Gene

GeneLoc Exon Structure for
RF00003-086

Expression for RF00003-086 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00003-086 Gene

Orthologs for RF00003-086 Gene

No data available for Orthologs and Evolution for RF00003-086 Gene

Paralogs for RF00003-086 Gene

No data available for Paralogs for RF00003-086 Gene

Variants for RF00003-086 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00003-086 Gene

Disorders for RF00003-086 Gene

No disorders were found for RF00003-086 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00003-086 Gene

Publications for RF00003-086 Gene

No publications were found for RF00003-086 Gene.

No data available for Mastermind for RF00003-086 Gene

Products for RF00003-086 Gene

Sources for RF00003-086 Gene