Aliases for RF00003-038 Gene

Subcategory (RNA class) for RF00003-038 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00003-038 Gene

Previous GeneCards Identifiers for RF00003-038 Gene

  • GC17M048950

No data available for External Ids for RF00003-038 Gene

Summaries for RF00003-038 Gene

GeneCards Summary for RF00003-038 Gene

RF00003-038 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00003-038 Gene

Additional gene information for RF00003-038 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00003-038 Gene

Genomics for RF00003-038 Gene

GeneHancer (GH) Regulatory Elements for RF00003-038 Gene

Promoters and enhancers for RF00003-038 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J000797 Enhancer 0.5 Ensembl 500.7 -0.1 -66 1.6 HNRNPK HDAC2 POLR2A SPI1 ARID1B PRDM10 CBFA2T3 RF00003-038 RNU1-109P ENOSF1 TYMS lnc-ADCYAP1-7 lnc-ENOSF1-4 YES1
GH18J000794 Enhancer 0.2 Ensembl 500.7 +1.5 1534 0.4 RF00003-038 RNU1-109P ENOSF1 YES1 lnc-ENOSF1-4 RF00017-2601
GH18J000801 Enhancer 0.6 Ensembl 0.7 -2.3 -2266 2.4 CEBPB CEBPG POLR2H PBX2 SPI1 MEIS2 PRDM4 HLF ZNF316 PKNOX1 ENOSF1 ENSG00000273355 RF00003-038 RNU1-109P lnc-ADCYAP1-7 lnc-ENOSF1-4 YES1
GH18J000778 Enhancer 0.9 Ensembl ENCODE 0.4 +19.4 19434 4.6 NFIC CEBPG TBP BCOR FOS NR2F1 ZC3H8 ADNP SMAD5 PRDM6 YES1 ENOSF1 THOC1 ENSG00000273355 RF00003-038 RNU1-109P RF00017-2601 lnc-ENOSF1-4
GH18J000769 Enhancer 1 Ensembl ENCODE 0.3 +27.3 27340 2.1 EP300 NCOR1 KDM6A TCF7 TGIF2 SKI ZBTB26 TBX3 ZKSCAN8 FOXA2 ENOSF1 ENSG00000273355 RF00017-2601 RF00003-038 RNU1-109P YES1 lnc-ENOSF1-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00003-038 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00003-038 Gene

Genomic Locations for RF00003-038 Gene
chr18:797,989-798,135
(GRCh38/hg38)
Size:
147 bases
Orientation:
Minus strand

Genomic View for RF00003-038 Gene

Genes around RF00003-038 on UCSC Golden Path with GeneCards custom track

RF00003-038 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00003-038 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00003-038 Gene

Proteins for RF00003-038 Gene

Post-translational modifications for RF00003-038 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00003-038 Gene

Domains & Families for RF00003-038 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00003-038 Gene

Function for RF00003-038 Gene

Phenotypes From GWAS Catalog for RF00003-038 Gene

miRNA for RF00003-038 Gene

miRTarBase miRNAs that target RF00003-038

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00003-038 Gene

Localization for RF00003-038 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00003-038 Gene

Pathways & Interactions for RF00003-038 Gene

PathCards logo

SuperPathways for RF00003-038 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00003-038 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00003-038 Gene

Drugs & Compounds for RF00003-038 Gene

No Compound Related Data Available

Transcripts for RF00003-038 Gene

mRNA/cDNA for RF00003-038 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00003-038 Gene

No ASD Table

Relevant External Links for RF00003-038 Gene

GeneLoc Exon Structure for
RF00003-038

Expression for RF00003-038 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00003-038 Gene

Orthologs for RF00003-038 Gene

No data available for Orthologs and Evolution for RF00003-038 Gene

Paralogs for RF00003-038 Gene

No data available for Paralogs for RF00003-038 Gene

Variants for RF00003-038 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00003-038 Gene

Disorders for RF00003-038 Gene

No disorders were found for RF00003-038 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00003-038 Gene

Publications for RF00003-038 Gene

No publications were found for RF00003-038 Gene.

No data available for Mastermind for RF00003-038 Gene

Products for RF00003-038 Gene

Sources for RF00003-038 Gene