Aliases for RF00003-017 Gene

Subcategory (RNA class) for RF00003-017 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00003-017 Gene

Previous GeneCards Identifiers for RF00003-017 Gene

  • GC01M245135

No data available for External Ids for RF00003-017 Gene

Summaries for RF00003-017 Gene

GeneCards Summary for RF00003-017 Gene

RF00003-017 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00003-017 Gene

Additional gene information for RF00003-017 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00003-017 Gene

Genomics for RF00003-017 Gene

GeneHancer (GH) Regulatory Elements for RF00003-017 Gene

Promoters and enhancers for RF00003-017 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J019710 Enhancer 0.7 Ensembl ENCODE 0.4 -12.6 -12572 2.7 TCF12 FOS FOSL2 CEBPB JUN FOSL1 JUND EP300 POLR2A NFE2L2 LINC02398 RNU1-146P RF00003-017 lnc-PLEKHA5-4 AEBP2
GH12J019694 Enhancer 0.7 Ensembl ENCODE 0.3 -29.1 -29077 1.7 ATF2 CEBPG FOS CEBPB JUND MYC POLR2A ATF7 STAT3 RNU1-146P SLCO1C1 LINC02398 lnc-PLEKHA5-4 RF00003-017 AEBP2
GH12J019689 Enhancer 0.6 Ensembl ENCODE 0.3 -34.5 -34515 1.3 NFIC FOS GATA3 STAT3 NFIB MYC RNU1-146P LINC02398 lnc-PLEKHA5-4 RF00003-017 AEBP2
GH12J019683 Enhancer 0.7 Ensembl ENCODE 0.3 -40.4 -40435 2.8 JUND FOS FOSL2 GATA2 SMARCA4 JUN REST POLR2A FOXA1 lnc-PLEKHA5-4 RF00003-017 RNU1-146P AEBP2
GH12J019677 Enhancer 0.6 ENCODE 0.3 -45.5 -45530 1.8 ZBTB40 TRIM22 NBN HDGF TBX21 ATF7 TARDBP MTA2 IKZF1 IKZF2 lnc-PLEKHA5-4 RF00003-017 RNU1-146P AEBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00003-017 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00003-017 Gene

Genomic Locations for RF00003-017 Gene
chr12:19,724,435-19,724,599
(GRCh38/hg38)
Size:
165 bases
Orientation:
Plus strand

Genomic View for RF00003-017 Gene

Genes around RF00003-017 on UCSC Golden Path with GeneCards custom track

RF00003-017 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00003-017 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00003-017 Gene

Proteins for RF00003-017 Gene

Post-translational modifications for RF00003-017 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00003-017 Gene

Domains & Families for RF00003-017 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00003-017 Gene

Function for RF00003-017 Gene

Phenotypes From GWAS Catalog for RF00003-017 Gene

miRNA for RF00003-017 Gene

miRTarBase miRNAs that target RF00003-017

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00003-017 Gene

Localization for RF00003-017 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00003-017 Gene

Pathways & Interactions for RF00003-017 Gene

PathCards logo

SuperPathways for RF00003-017 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00003-017 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00003-017 Gene

Drugs & Compounds for RF00003-017 Gene

No Compound Related Data Available

Transcripts for RF00003-017 Gene

mRNA/cDNA for RF00003-017 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00003-017 Gene

No ASD Table

Relevant External Links for RF00003-017 Gene

GeneLoc Exon Structure for
RF00003-017

Expression for RF00003-017 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00003-017 Gene

Orthologs for RF00003-017 Gene

No data available for Orthologs and Evolution for RF00003-017 Gene

Paralogs for RF00003-017 Gene

No data available for Paralogs for RF00003-017 Gene

Variants for RF00003-017 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00003-017 Gene

Disorders for RF00003-017 Gene

No disorders were found for RF00003-017 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00003-017 Gene

Publications for RF00003-017 Gene

No publications were found for RF00003-017 Gene.

No data available for Mastermind for RF00003-017 Gene

Products for RF00003-017 Gene

Sources for RF00003-017 Gene