Aliases for RF00001-059 Gene

Subcategory (RNA class) for RF00001-059 Gene

rRNA

Quality Score for this RNA gene is

11

Aliases for RF00001-059 Gene

No data available for External Ids for RF00001-059 Gene

Summaries for RF00001-059 Gene

GeneCards Summary for RF00001-059 Gene

RF00001-059 is an RNA Gene, and is affiliated with the rRNA class.

Rfam classification for RF00001-059 Gene

Additional gene information for RF00001-059 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00001-059 Gene

Genomics for RF00001-059 Gene

GeneHancer (GH) Regulatory Elements for RF00001-059 Gene

Promoters and enhancers for RF00001-059 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J019398 Enhancer 0.8 Ensembl ENCODE 0.6 +2.7 2715 1.9 RAD21 SP1 MAFK RXRA ATF7 ZXDB JUND PRDM1 ATF3 YY1 NAV2 RF00001-059 RNA5SP335 NAV2-IT1
GH11J019418 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -17.6 -17604 2.8 E2F8 SREBF1 FOXA1 ZNF217 RAD21 MNT SP1 NCOA3 CEBPG EGR1 NAV2 RF00001-059 RNA5SP335 lnc-E2F8-3
GH11J019432 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.3 -30331 3.8 SP1 CREM IKZF1 IKZF2 ZNF143 ZNF692 CBFB ZSCAN29 ZNF512B ZBTB20 ENSG00000254966 NAV2-AS4 NAV2 RNA5SP335 RF00001-059 lnc-E2F8-3
GH11J019441 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -40.2 -40220 2.8 ZNF24 SP1 SMARCE1 RUNX1 JUND CC2D1A ETV6 ELF1 RELA L3MBTL2 SPTY2D1 ENSG00000256361 TSG101 IGSF22 HTATIP2 lnc-E2F8-3 RF00001-059 RNA5SP335 NAV2
GH11J019389 Enhancer 0.8 Ensembl ENCODE 0.4 +11.9 11902 1.9 FOXA1 RAD21 SP1 NCOA3 TFE3 PKNOX1 ZIC2 CEBPA RXRA FOXA2 NAV2-AS4 HTATIP2 NAV2-IT1 RNA5SP335 RF00001-059 NAV2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00001-059 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00001-059 Gene

Genomic Locations for RF00001-059 Gene
chr11:19,401,872-19,401,981
(GRCh38/hg38)
Size:
110 bases
Orientation:
Minus strand

Genomic View for RF00001-059 Gene

Genes around RF00001-059 on UCSC Golden Path with GeneCards custom track

RF00001-059 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00001-059 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00001-059 Gene

Proteins for RF00001-059 Gene

Post-translational modifications for RF00001-059 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00001-059 Gene

Domains & Families for RF00001-059 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00001-059 Gene

Function for RF00001-059 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00001-059 Gene

Localization for RF00001-059 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00001-059 Gene

Pathways & Interactions for RF00001-059 Gene

PathCards logo

SuperPathways for RF00001-059 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00001-059 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00001-059 Gene

Drugs & Compounds for RF00001-059 Gene

No Compound Related Data Available

Transcripts for RF00001-059 Gene

mRNA/cDNA for RF00001-059 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00001-059 Gene

No ASD Table

Relevant External Links for RF00001-059 Gene

GeneLoc Exon Structure for
RF00001-059

Expression for RF00001-059 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00001-059 Gene

Orthologs for RF00001-059 Gene

No data available for Orthologs and Evolution for RF00001-059 Gene

Paralogs for RF00001-059 Gene

No data available for Paralogs for RF00001-059 Gene

Variants for RF00001-059 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00001-059 Gene

Disorders for RF00001-059 Gene

No disorders were found for RF00001-059 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00001-059 Gene

Publications for RF00001-059 Gene

No publications were found for RF00001-059 Gene.

No data available for External Links for RF00001-059 Gene

Products for RF00001-059 Gene

Sources for RF00001-059 Gene