Aliases for RF00001-048 Gene

Subcategory (RNA class) for RF00001-048 Gene

rRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00001-048 Gene

No data available for External Ids for RF00001-048 Gene

Summaries for RF00001-048 Gene

GeneCards Summary for RF00001-048 Gene

RF00001-048 is an RNA Gene, and is affiliated with the rRNA class.

Rfam classification for RF00001-048 Gene

Additional gene information for RF00001-048 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00001-048 Gene

Genomics for RF00001-048 Gene

GeneHancer (GH) Regulatory Elements for RF00001-048 Gene

Promoters and enhancers for RF00001-048 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J096617 Enhancer 1.3 Ensembl ENCODE dbSUPER 500.7 +0.2 160 4.3 PHB2 ZIC2 ZBTB11 AFF1 TARDBP REST HES1 TOE1 MYC CTBP1 RF00001-048 RNA5SP324 lnc-TM9SF3-1 NPM1P26 PIK3AP1 MIR607 LCOR OPALIN RPS2P36 lnc-TM9SF3-2
GH10J096616 Enhancer 0.4 Ensembl dbSUPER 0.7 -2.5 -2475 0.2 POLR2A PIK3AP1 OPALIN RF00001-048 RNA5SP324 lnc-LCOR-3 lnc-TM9SF3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00001-048 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00001-048 Gene

Genomic Locations for RF00001-048 Gene
chr10:96,619,376-96,619,483
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for RF00001-048 Gene

Genes around RF00001-048 on UCSC Golden Path with GeneCards custom track

RF00001-048 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00001-048 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00001-048 Gene

Proteins for RF00001-048 Gene

Post-translational modifications for RF00001-048 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00001-048 Gene

Domains & Families for RF00001-048 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00001-048 Gene

Function for RF00001-048 Gene

miRNA for RF00001-048 Gene

miRTarBase miRNAs that target RF00001-048

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00001-048 Gene

Localization for RF00001-048 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00001-048 Gene

Pathways & Interactions for RF00001-048 Gene

PathCards logo

SuperPathways for RF00001-048 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00001-048 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00001-048 Gene

Drugs & Compounds for RF00001-048 Gene

No Compound Related Data Available

Transcripts for RF00001-048 Gene

mRNA/cDNA for RF00001-048 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00001-048 Gene

No ASD Table

Relevant External Links for RF00001-048 Gene

GeneLoc Exon Structure for
RF00001-048

Expression for RF00001-048 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00001-048 Gene

Orthologs for RF00001-048 Gene

No data available for Orthologs and Evolution for RF00001-048 Gene

Paralogs for RF00001-048 Gene

No data available for Paralogs for RF00001-048 Gene

Variants for RF00001-048 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00001-048 Gene

Disorders for RF00001-048 Gene

No disorders were found for RF00001-048 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00001-048 Gene

Publications for RF00001-048 Gene

No publications were found for RF00001-048 Gene.

No data available for Mastermind for RF00001-048 Gene

Products for RF00001-048 Gene

Sources for RF00001-048 Gene