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Aliases for REV3L-IT1 Gene

Subcategory (RNA class) for REV3L-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for REV3L-IT1 Gene

  • REV3L Intronic Transcript 1 2 3 5
  • REV3L Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for REV3L-IT1 Gene

Previous GeneCards Identifiers for REV3L-IT1 Gene

  • GC00U933794
  • GC06M111682

Summaries for REV3L-IT1 Gene

GeneCards Summary for REV3L-IT1 Gene

REV3L-IT1 (REV3L Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for REV3L-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for REV3L-IT1 Gene

Genomics for REV3L-IT1 Gene

GeneHancer (GH) Regulatory Elements for REV3L-IT1 Gene

Promoters and enhancers for REV3L-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I111405 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 -45.1 -45123 2 HDGF PKNOX1 SMAD1 BMI1 BATF IRF4 RARA ZNF143 ATF7 ETV6 REV3L TRAF3IP2-AS1 ENSG00000230177 SLC16A10 ENSG00000255389 TRAF3IP2 MFSD4B BRD7P4 REV3L-IT1
GH06I111426 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 -65.8 -65802 1.9 SOX13 FOXA2 SAP130 JUN ZNF384 CEBPG BATF ZNF644 KMT2B YY1 MFSD4B SLC16A10 TRAF3IP2 REV3L BRD7P4 REV3L-IT1
GH06I111410 Enhancer 0.9 Ensembl ENCODE 0.2 -49.2 -49173 0.8 SCRT1 HDAC1 ELF1 DPF2 ATF2 ZBTB5 CC2D1A ZNF217 FOXK2 IKZF1 REV3L TRAF3IP2-AS1 ENSG00000230177 BRD7P4 REV3L-IT1
GH06I111423 Enhancer 0.7 FANTOM5 0.2 -61.7 -61727 0.1 SMARCA5 HDGF HDAC1 SMARCE1 BCOR ZSCAN4 ZMYM3 YBX1 ATF2 IKZF1 SLC16A10 REV3L TRAF3IP2 BRD7P4 REV3L-IT1
GH06I111425 Enhancer 0.7 Ensembl 0.2 -62.1 -62094 0.6 HDGF HDAC1 BCOR MEIS2 ZSCAN4 ZMYM3 YBX1 SCRT2 IKZF2 SMARCE1 ENSG00000255389 TRAF3IP2 REV3L BRD7P4 REV3L-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around REV3L-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for REV3L-IT1 Gene

Genomic Locations for REV3L-IT1 Gene
chr6:111,360,641-111,361,607
(GRCh38/hg38)
Size:
967 bases
Orientation:
Minus strand
chr6:111,681,844-111,682,810
(GRCh37/hg19)

Genomic View for REV3L-IT1 Gene

Genes around REV3L-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
REV3L-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for REV3L-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for REV3L-IT1 Gene

Proteins for REV3L-IT1 Gene

Post-translational modifications for REV3L-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for REV3L-IT1 Gene

Domains & Families for REV3L-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for REV3L-IT1 Gene

Function for REV3L-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for REV3L-IT1 Gene

Localization for REV3L-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for REV3L-IT1 Gene

Pathways & Interactions for REV3L-IT1 Gene

SuperPathways for REV3L-IT1 Gene

No Data Available

Interacting Proteins for REV3L-IT1 Gene

Gene Ontology (GO) - Biological Process for REV3L-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for REV3L-IT1 Gene

Drugs & Compounds for REV3L-IT1 Gene

No Compound Related Data Available

Transcripts for REV3L-IT1 Gene

mRNA/cDNA for REV3L-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for REV3L-IT1 Gene

No ASD Table

Relevant External Links for REV3L-IT1 Gene

GeneLoc Exon Structure for
REV3L-IT1
ECgene alternative splicing isoforms for
REV3L-IT1

Expression for REV3L-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for REV3L-IT1 Gene

genes like me logo Genes that share expression patterns with REV3L-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for REV3L-IT1 Gene

Orthologs for REV3L-IT1 Gene

Evolution for REV3L-IT1 Gene

ENSEMBL:
Gene Tree for REV3L-IT1 (if available)
TreeFam:
Gene Tree for REV3L-IT1 (if available)

No data available for Orthologs for REV3L-IT1 Gene

Paralogs for REV3L-IT1 Gene

No data available for Paralogs for REV3L-IT1 Gene

Variants for REV3L-IT1 Gene

Additional Variant Information for REV3L-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
REV3L-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for REV3L-IT1 Gene

Disorders for REV3L-IT1 Gene

No disorders were found for REV3L-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for REV3L-IT1 Gene

Publications for REV3L-IT1 Gene

  1. Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. (PMID: 7566098) Adams MD … White O (Nature 1995) 3 58

Products for REV3L-IT1 Gene

Sources for REV3L-IT1 Gene

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