Aliases for RERE-AS1 Gene

Subcategory (RNA class) for RERE-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for RERE-AS1 Gene

  • RERE Antisense RNA 1 2 3 5
  • HSALNG0000636 169
  • Lnc-SLC45A1-1 170
  • NONHSAG000292 94

External Ids for RERE-AS1 Gene

Summaries for RERE-AS1 Gene

GeneCards Summary for RERE-AS1 Gene

RERE-AS1 (RERE Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RERE-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RERE-AS1 Gene

Genomics for RERE-AS1 Gene

GeneHancer (GH) Regulatory Elements for RERE-AS1 Gene

Promoters and enhancers for RERE-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RERE-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RERE-AS1 Gene

Genomic Locations for RERE-AS1 Gene
chr1:8,423,458-8,435,016
(GRCh38/hg38)
Size:
11,559 bases
Orientation:
Plus strand
chr1:8,484,705-8,494,898
(GRCh37/hg19)
Size:
10,194 bases
Orientation:
Plus strand

Genomic View for RERE-AS1 Gene

Genes around RERE-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RERE-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RERE-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RERE-AS1 Gene

Proteins for RERE-AS1 Gene

Post-translational modifications for RERE-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RERE-AS1 Gene

Domains & Families for RERE-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RERE-AS1 Gene

Function for RERE-AS1 Gene

Phenotypes From GWAS Catalog for RERE-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RERE-AS1 Gene

Localization for RERE-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RERE-AS1 Gene

Pathways & Interactions for RERE-AS1 Gene

PathCards logo

SuperPathways for RERE-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RERE-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RERE-AS1 Gene

Drugs & Compounds for RERE-AS1 Gene

No Compound Related Data Available

Transcripts for RERE-AS1 Gene

mRNA/cDNA for RERE-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) NONCODE transcripts :
(8) RNACentral transcripts :
(5) LncBook transcripts :
(7) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RERE-AS1 Gene

No ASD Table

Relevant External Links for RERE-AS1 Gene

GeneLoc Exon Structure for
RERE-AS1
ECgene alternative splicing isoforms for
RERE-AS1

Expression for RERE-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RERE-AS1 Gene

Orthologs for RERE-AS1 Gene

Evolution for RERE-AS1 Gene

ENSEMBL:
Gene Tree for RERE-AS1 (if available)
TreeFam:
Gene Tree for RERE-AS1 (if available)

No data available for Orthologs for RERE-AS1 Gene

Paralogs for RERE-AS1 Gene

No data available for Paralogs for RERE-AS1 Gene

Variants for RERE-AS1 Gene

Sequence variations from dbSNP and Humsavar for RERE-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000302810 -- 8,430,082(+) G/C intron_variant
rs1000618153 -- 8,423,415(+) C/T upstream_transcript_variant
rs1000752376 -- 8,424,097(+) C/T upstream_transcript_variant
rs1000916167 -- 8,427,195(+) G/C intron_variant
rs1001419451 -- 8,426,688(+) A/G intron_variant

Additional Variant Information for RERE-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RERE-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RERE-AS1 Gene

Disorders for RERE-AS1 Gene

No disorders were found for RERE-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RERE-AS1 Gene

Publications for RERE-AS1 Gene

  1. Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease. (PMID: 24586183) Medici M … Peeters RP (PLoS genetics 2014) 3 56

Products for RERE-AS1 Gene

Sources for RERE-AS1 Gene