Aliases for RDM1P2 Gene

Aliases for RDM1P2 Gene

  • RDM1 Pseudogene 2 2 3 5
  • RDM1P2 5

External Ids for RDM1P2 Gene

Summaries for RDM1P2 Gene

GeneCards Summary for RDM1P2 Gene

RDM1P2 (RDM1 Pseudogene 2) is a Pseudogene.

Additional gene information for RDM1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RDM1P2 Gene

Genomics for RDM1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RDM1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J046503 Enhancer 0.2 Ensembl 250.7 +0.6 555 2.6 HSALNG0116944 RDM1P2 piR-39073-002 piR-31146-002 LINC02210 LRRC37A LRRC37A2 ARL17A ARL17B
GH17J046279 Enhancer 1 Ensembl ENCODE 4 -224.0 -224045 1 IKZF1 ZNF600 JUND ZNF10 ZNF639 ZEB1 RARA ZNF843 FOSL2 ZNF146 LRRC37A4P ARL17A ARL17B RPS7P11 ENSG00000262372 RDM1P2 piR-38904-016 HSALNG0116926 LRRC37A HSALNG0116920
GH17J046812 Enhancer 0.2 Ensembl 4.9 +307.2 307154 0.6 WNT3 RDM1P2 lnc-RPRML-5 RF00017-2176 lnc-WNT3-1 NSF LRRC37A2
GH17J046508 Enhancer 0.2 Ensembl 0.4 +5.1 5055 0.4 piR-38384-003 piR-34262-002 piR-59621-003 LRRC37A2 piR-36357-002 RDM1P2 ARL17A ARL17B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RDM1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RDM1P2 Gene

Latest Assembly
chr17:46,503,946-46,509,339
(GRCh38/hg38)
Size:
5,394 bases
Orientation:
Plus strand

Previous Assembly
chr17:44,581,312-44,586,705
(GRCh37/hg19 by Entrez Gene)
Size:
5,394 bases
Orientation:
Plus strand

chr17:44,581,312-44,586,705
(GRCh37/hg19 by Ensembl)
Size:
5,394 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr17(ALT_REF_LOCI_1):242,033-247,426 (-)
  • chr17(ALT_REF_LOCI_2):1,023,640-1,029,033 (+)

Genomic View for RDM1P2 Gene

Genes around RDM1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RDM1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RDM1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RDM1P2 Gene

Proteins for RDM1P2 Gene

Post-translational modifications for RDM1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RDM1P2 Gene

Domains & Families for RDM1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RDM1P2 Gene

Function for RDM1P2 Gene

Phenotypes From GWAS Catalog for RDM1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RDM1P2 Gene

Localization for RDM1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RDM1P2 Gene

Pathways & Interactions for RDM1P2 Gene

PathCards logo

SuperPathways for RDM1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RDM1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RDM1P2 Gene

Drugs & Compounds for RDM1P2 Gene

No Compound Related Data Available

Transcripts for RDM1P2 Gene

mRNA/cDNA for RDM1P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RDM1P2 Gene

No ASD Table

Relevant External Links for RDM1P2 Gene

GeneLoc Exon Structure for
RDM1P2

Expression for RDM1P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RDM1P2 Gene

Orthologs for RDM1P2 Gene

Evolution for RDM1P2 Gene

ENSEMBL:
Gene Tree for RDM1P2 (if available)
TreeFam:
Gene Tree for RDM1P2 (if available)
Alliance of Genome Resources:
Additional Orthologs for RDM1P2

No data available for Orthologs for RDM1P2 Gene

Paralogs for RDM1P2 Gene

No data available for Paralogs for RDM1P2 Gene

Variants for RDM1P2 Gene

Additional Variant Information for RDM1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RDM1P2
Leiden Open Variation Database (LOVD)
RDM1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RDM1P2 Gene

Disorders for RDM1P2 Gene

No disorders were found for RDM1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RDM1P2 Gene

Publications for RDM1P2 Gene

No publications were found for RDM1P2 Gene.

Products for RDM1P2 Gene

Sources for RDM1P2 Gene