Aliases for RCN1P2 Gene

Aliases for RCN1P2 Gene

  • Reticulocalbin 1 Pseudogene 2 2 3 5
  • Reticulocalbin 1, EF-Hand Calcium Binding Domain Pseudogene 2 2 3
  • Reticulocalbin 1 Like 3

External Ids for RCN1P2 Gene

Previous GeneCards Identifiers for RCN1P2 Gene

  • GC13M045968
  • GC13M045970
  • GC13M045979

Summaries for RCN1P2 Gene

GeneCards Summary for RCN1P2 Gene

RCN1P2 (Reticulocalbin 1 Pseudogene 2) is a Pseudogene.

Additional gene information for RCN1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RCN1P2 Gene

Genomics for RCN1P2 Gene

GeneHancer (GH) Regulatory Elements for RCN1P2 Gene

Promoters and enhancers for RCN1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J045391 Promoter 0.4 Ensembl 500.7 +0.2 225 0.4 AGO2 RCN1P2 TPT1-AS1 COG3 piR-36573-026
GH13J044810 Enhancer 1.1 Ensembl ENCODE 29.4 +576.4 576438 10.4 ZNF217 ZNF300 TCF12 JUND TEAD4 FOS ZIC2 TCF7 CUX1 ZNF662 GPALPP1 RN7SL49P TPT1-AS1 RCN1P2 COG3 NUFIP1 ERICH6B SLC25A30-AS1 TSC22D1 CCDC122
GH13J044917 Promoter/Enhancer 2 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 12.1 +473.0 473013 2.7 RXRA ZBTB40 ZNF217 EP300 CTCF ZSCAN5C SIN3A NRF1 MYC USF1 TRE-TTC2-1 lnc-GPALPP1-7 GPALPP1 RN7SL49P NUFIP1 TSC22D1 RCN1P2 ERICH6B TPT1-AS1 KCTD4
GH13J045338 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.2 +50.7 50656 4.6 HNRNPK ZBTB40 EP300 CTCF NRF1 MYC POLR2G SP1 NCOR1 PHF8 TPT1-AS1 ENSG00000273149 COG3 TPT1 lnc-SLC25A30-4 SLC25A30 SLC25A30-AS1 RCN1P2
GH13J044710 Promoter/Enhancer 1.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.3 +678.0 678047 6.4 TCF12 JUND FOS ZNF639 ZNF354C REST ZNF623 EP300 NR2F2 ZNF266 TSC22D1 GPALPP1 RN7SL49P ERICH6B COG3 TPT1-AS1 SMARCE1P5 RCN1P2 KCTD4 ENSG00000276527
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RCN1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RCN1P2 Gene

Genomic Locations for RCN1P2 Gene
chr13:45,389,294-45,391,426
(GRCh38/hg38)
Size:
2,133 bases
Orientation:
Minus strand
chr13:45,963,429-45,965,561
(GRCh37/hg19)
Size:
2,133 bases
Orientation:
Minus strand

Genomic View for RCN1P2 Gene

Genes around RCN1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RCN1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RCN1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RCN1P2 Gene

Proteins for RCN1P2 Gene

Post-translational modifications for RCN1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RCN1P2 Gene

Domains & Families for RCN1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RCN1P2 Gene

Function for RCN1P2 Gene

Phenotypes From GWAS Catalog for RCN1P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RCN1P2 Gene

Localization for RCN1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RCN1P2 Gene

Pathways & Interactions for RCN1P2 Gene

PathCards logo

SuperPathways for RCN1P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RCN1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RCN1P2 Gene

Drugs & Compounds for RCN1P2 Gene

No Compound Related Data Available

Transcripts for RCN1P2 Gene

mRNA/cDNA for RCN1P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RCN1P2 Gene

No ASD Table

Relevant External Links for RCN1P2 Gene

GeneLoc Exon Structure for
RCN1P2

Expression for RCN1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RCN1P2 Gene

mRNA expression in normal human tissues for RCN1P2 Gene
genes like me logo Genes that share expression patterns with RCN1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RCN1P2 Gene

Orthologs for RCN1P2 Gene

Evolution for RCN1P2 Gene

ENSEMBL:
Gene Tree for RCN1P2 (if available)
TreeFam:
Gene Tree for RCN1P2 (if available)

No data available for Orthologs for RCN1P2 Gene

Paralogs for RCN1P2 Gene

No data available for Paralogs for RCN1P2 Gene

Variants for RCN1P2 Gene

Additional Variant Information for RCN1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RCN1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RCN1P2 Gene

Disorders for RCN1P2 Gene

No disorders were found for RCN1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RCN1P2 Gene

Publications for RCN1P2 Gene

No publications were found for RCN1P2 Gene.

Products for RCN1P2 Gene

Sources for RCN1P2 Gene