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Aliases for RCAN3AS Gene

Subcategory (RNA class) for RCAN3AS Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RCAN3AS Gene

  • RCAN3 Antisense RNA 2 3
  • RCAN3 Antisense 2
  • TCONS_00001428 3

External Ids for RCAN3AS Gene

Previous GeneCards Identifiers for RCAN3AS Gene

  • GC01U903302

Summaries for RCAN3AS Gene

GeneCards Summary for RCAN3AS Gene

RCAN3AS (RCAN3 Antisense RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RCAN3AS Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RCAN3AS Gene

Genomics for RCAN3AS Gene

GeneHancer (GH) Regulatory Elements for RCAN3AS Gene

Promoters and enhancers for RCAN3AS Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I024501 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.7 -683 3.8 HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A DMAP1 ZNF213 ZNF263 SP3 RCAN3 RCAN3AS NCMAP NIPAL3 STPG1 GRHL3 GC01M024529
GH01I024506 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.5 -5464 2.4 HDAC1 MEIS2 PKNOX1 USF1 FOXA2 ETV1 ZNF121 SCRT2 CBFA2T2 NFE2 RCAN3 NCMAP NIPAL3 RUNX3 SRRM1 RCAN3AS GC01M024529
GH01I024515 Enhancer 0.7 ENCODE 0.4 -13.4 -13406 0.2 SIN3A ZEB1 FOSL1 CTBP1 GATA3 ZNF766 POLR3A ADNP FOSL2 NFE2 NCMAP GC01M024529 RCAN3 RCAN3AS
GH01I024514 Promoter/Enhancer 0.7 EPDnew dbSUPER 0.4 -12.0 -11990 0.1 RCAN3 NCMAP RCAN3AS GC01M024529
GH01I024519 Enhancer 0.5 dbSUPER 0.4 -17.5 -17454 1.3 ZNF146 ZNF280D ZNF580 KDM1A NCMAP LOC105376871 GRHL3 GC01M024529 RCAN3 RCAN3AS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RCAN3AS on UCSC Golden Path with GeneCards custom track

Genomic Locations for RCAN3AS Gene

Genomic Locations for RCAN3AS Gene
6,028 bases
Minus strand

Genomic View for RCAN3AS Gene

Genes around RCAN3AS on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RCAN3AS Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RCAN3AS Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RCAN3AS Gene

Proteins for RCAN3AS Gene

  • Protein details for RCAN3AS Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein Accession:

    Protein attributes for RCAN3AS Gene

    56 amino acids
    Molecular mass:
    6356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RCAN3AS Gene

Post-translational modifications for RCAN3AS Gene

No Post-translational modifications

No data available for DME Specific Peptides for RCAN3AS Gene

Domains & Families for RCAN3AS Gene

Protein Domains for RCAN3AS Gene


Suggested Antigen Peptide Sequences for RCAN3AS Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RCAN3AS: view

No data available for Gene Families and UniProtKB/Swiss-Prot for RCAN3AS Gene

Function for RCAN3AS Gene

Phenotypes From GWAS Catalog for RCAN3AS Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RCAN3AS Gene

Localization for RCAN3AS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RCAN3AS Gene

Pathways & Interactions for RCAN3AS Gene

SuperPathways for RCAN3AS Gene

No Data Available

Interacting Proteins for RCAN3AS Gene

Gene Ontology (GO) - Biological Process for RCAN3AS Gene


No data available for Pathways by source and SIGNOR curated interactions for RCAN3AS Gene

Drugs & Compounds for RCAN3AS Gene

No Compound Related Data Available

Transcripts for RCAN3AS Gene

mRNA/cDNA for RCAN3AS Gene

(5) Additional mRNA sequences :

Unigene Clusters for RCAN3AS Gene

RCAN3 antisense:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RCAN3AS Gene

No ASD Table

Relevant External Links for RCAN3AS Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RCAN3AS Gene

NURSA nuclear receptor signaling pathways regulating expression of RCAN3AS Gene:


SOURCE GeneReport for Unigene cluster for RCAN3AS Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RCAN3AS Gene

Orthologs for RCAN3AS Gene

No data available for Orthologs and Evolution for RCAN3AS Gene

Paralogs for RCAN3AS Gene

No data available for Paralogs for RCAN3AS Gene

Variants for RCAN3AS Gene

Sequence variations from dbSNP and Humsavar for RCAN3AS Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000601409 -- 24,499,206(-) G/T intron_variant
rs1000655164 -- 24,499,480(-) G/C intron_variant
rs1001103325 -- 24,503,006(-) G/C upstream_transcript_variant
rs1001266761 -- 24,496,309(-) T/C downstream_transcript_variant
rs1001492203 -- 24,501,455(-) G/C intron_variant

Additional Variant Information for RCAN3AS Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RCAN3AS Gene

Disorders for RCAN3AS Gene

Additional Disease Information for RCAN3AS

No disorders were found for RCAN3AS Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RCAN3AS Gene

Publications for RCAN3AS Gene

  1. Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus. (PMID: 21961037) Facchin F … Canaider S (PloS one 2011) 2 3 58
  2. Human RCAN3 gene expression and cell growth in endothelial cells. (PMID: 21042787) Canaider S … Perretti M (International journal of molecular medicine 2010) 2 58

Products for RCAN3AS Gene

Sources for RCAN3AS Gene

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