Aliases for RCAN3AS Gene
Subcategory (RNA class) for RCAN3AS Gene
non-coding RNA
Quality Score for this RNA gene is
2
Previous GeneCards Identifiers for RCAN3AS Gene
- GC01U903302
Summaries for RCAN3AS Gene
GeneCards Summary for RCAN3AS Gene
RCAN3AS (RCAN3 Antisense RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for RCAN3AS Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RCAN3AS Gene
Genomics for RCAN3AS Gene
GeneHancer (GH) Regulatory Elements for RCAN3AS Gene
Promoters and enhancers for RCAN3AS Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01I024501 | Promoter/Enhancer | 2.2 | EPDnew Ensembl ENCODE dbSUPER | 550.8 | -0.7 | -683 | 3.8 | HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A DMAP1 ZNF213 ZNF263 SP3 | RCAN3 RCAN3AS NCMAP NIPAL3 STPG1 GRHL3 GC01M024529 | |
| GH01I024506 | Enhancer | 1.4 | FANTOM5 Ensembl ENCODE dbSUPER | 0.4 | -5.5 | -5464 | 2.4 | HDAC1 MEIS2 PKNOX1 USF1 FOXA2 ETV1 ZNF121 SCRT2 CBFA2T2 NFE2 | RCAN3 NCMAP NIPAL3 RUNX3 SRRM1 RCAN3AS GC01M024529 | |
| GH01I024515 | Enhancer | 0.7 | ENCODE | 0.4 | -13.4 | -13406 | 0.2 | SIN3A ZEB1 FOSL1 CTBP1 GATA3 ZNF766 POLR3A ADNP FOSL2 NFE2 | NCMAP GC01M024529 RCAN3 RCAN3AS | |
| GH01I024514 | Promoter/Enhancer | 0.7 | EPDnew dbSUPER | 0.4 | -12.0 | -11990 | 0.1 | RCAN3 NCMAP RCAN3AS GC01M024529 | ||
| GH01I024519 | Enhancer | 0.5 | dbSUPER | 0.4 | -17.5 | -17454 | 1.3 | ZNF146 ZNF280D ZNF580 KDM1A | NCMAP LOC105376871 GRHL3 GC01M024529 RCAN3 RCAN3AS |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around RCAN3AS on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for RCAN3AS Gene
Genomic Locations for RCAN3AS Gene
- chr1:24,496,333-24,502,360
- (GRCh38/hg38)
- Size:
- 6,028 bases
- Orientation:
- Minus strand
Genomic View for RCAN3AS Gene
Genes around RCAN3AS on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p36.11 by Entrez Gene
- 1p36.11 by HGNC
RCAN3AS Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RCAN3AS Gene
Proteins for RCAN3AS Gene
-
Protein details for RCAN3AS Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- E3W6F2
- Recommended name:
- HCG1812040
- Protein Accession:
- E3W6F2
Protein attributes for RCAN3AS Gene
- Size:
- 56 amino acids
- Molecular mass:
- 6356 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for RCAN3AS Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for RCAN3AS
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RCAN3AS
- Origene Custom Protein Services for RCAN3AS
- Search GeneTex for Proteins for RCAN3AS
No data available for DME Specific Peptides for RCAN3AS Gene
Domains & Families for RCAN3AS Gene
Protein Domains for RCAN3AS Gene
- ProtoNet:
Suggested Antigen Peptide Sequences for RCAN3AS Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for RCAN3AS Gene
Function for RCAN3AS Gene
Phenotypes From GWAS Catalog for RCAN3AS Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for RCAN3AS
-
- Search ViGene Biosciences for RCAN3AS
CRISPR Products
- Browse CRISPR knockouts for RCAN3AS
- Applied Biological Materials CRISPR for RCAN3AS
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for RCAN3AS
Inhibitory RNA Products
- Search ViGene Biosciences for RCAN3AS
Clone Products
- GenScript: Custom all cDNA clones Services for RCAN3AS
- VectorBuilder custom plasmid, inducible vectors for RCAN3AS
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RCAN3AS
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for RCAN3AS
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RCAN3AS Gene
Localization for RCAN3AS Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RCAN3AS Gene
Transcripts for RCAN3AS Gene
mRNA/cDNA for RCAN3AS Gene
- (5) Additional mRNA sequences :
CRISPR Products
- Browse CRISPR knockouts for RCAN3AS
- Applied Biological Materials CRISPR for RCAN3AS
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for RCAN3AS
Inhibitory RNA Products
- Search ViGene Biosciences for RCAN3AS
Clone Products
- GenScript: Custom all cDNA clones Services for RCAN3AS
- VectorBuilder custom plasmid, inducible vectors for RCAN3AS
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RCAN3AS
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for RCAN3AS
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for RCAN3AS Gene
NURSA nuclear receptor signaling pathways regulating expression of RCAN3AS Gene:
RCAN3ASSOURCE GeneReport for Unigene cluster for RCAN3AS Gene:
Hs.399958
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RCAN3AS Gene
Orthologs for RCAN3AS Gene
No data available for Orthologs and Evolution for RCAN3AS Gene
Paralogs for RCAN3AS Gene
No data available for Paralogs for RCAN3AS Gene
Variants for RCAN3AS Gene
| SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000601409 | -- | 24,499,206(-) | G/T | intron_variant | |
| rs1000655164 | -- | 24,499,480(-) | G/C | intron_variant | |
| rs1001103325 | -- | 24,503,006(-) | G/C | upstream_transcript_variant | |
| rs1001266761 | -- | 24,496,309(-) | T/C | downstream_transcript_variant | |
| rs1001492203 | -- | 24,501,455(-) | G/C | intron_variant |
Additional Variant Information for RCAN3AS Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RCAN3AS
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RCAN3AS Gene
Disorders for RCAN3AS Gene
Additional Disease Information for RCAN3AS
No disorders were found for RCAN3AS Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RCAN3AS Gene
Publications for RCAN3AS Gene
- Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus. (PMID: 21961037) Facchin F … Canaider S (PloS one 2011) 2 3 58
- Human RCAN3 gene expression and cell growth in endothelial cells. (PMID: 21042787) Canaider S … Perretti M (International journal of molecular medicine 2010) 2 58
Products for RCAN3AS Gene
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for RCAN3AS
- VectorBuilder custom plasmid, inducible vectors for RCAN3AS
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RCAN3AS
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for RCAN3AS
- Search GeneTex for Proteins for RCAN3AS
- Search ViGene Biosciences for RCAN3AS
Sources for RCAN3AS Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems