Aliases for RBMS1P1 Gene

Aliases for RBMS1P1 Gene

  • RNA Binding Motif Single Stranded Interacting Protein 1 Pseudogene 1 2 3 5
  • RNA Binding Motif, Single Stranded Interacting Protein 1, Pseudogene 2 3
  • MSSP1 2 3
  • RBMS1P1 5
  • RBMS1P 3

External Ids for RBMS1P1 Gene

Previous HGNC Symbols for RBMS1P1 Gene

  • RBMS1P

Previous GeneCards Identifiers for RBMS1P1 Gene

  • GC12M066626
  • GC12M063677

Summaries for RBMS1P1 Gene

GeneCards Summary for RBMS1P1 Gene

RBMS1P1 (RNA Binding Motif Single Stranded Interacting Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for RBMS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RBMS1P1 Gene

Genomics for RBMS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RBMS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J066234 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.2 -167 2 RNF2 CREB1 PRDM10 ZNF512 ZNF692 BACH1 LARP7 ZNF143 RFX1 PATZ1 RBMS1P1 IRAK3 TMBIM4 ENSG00000228144 HELB ENSG00000256072 LLPH LLPH-DT MIR6502
GH12J066235 Enhancer 1 ENCODE dbSUPER 600.7 +1.0 1048 0.2 CREB1 PRDM10 ZNF629 ZNF512 RFX1 RFX5 ZNF692 JUND ZNF143 ZIC2 RBMS1P1 IRAK3 TMBIM4 ENSG00000228144 ENSG00000256072 LLPH LLPH-DT HELB piR-50443-083
GH12J066236 Promoter/Enhancer 0.6 Ensembl dbSUPER 600.7 -1.5 -1467 0.2 ZNF362 RBMS1P1 IRAK3 MIR6502 HELB
GH12J065613 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 12.3 +620.4 620378 2.7 GATAD2A TFE3 ZNF512 PRDM1 MTA2 MTA1 CEBPA SCRT2 MNT SOX13 RBMS1P1 LINC02454 ENSG00000256915 LOC100507065 HMGA2 MSRB3
GH12J066232 Enhancer 0.7 Ensembl dbSUPER 0.7 +2.7 2695 0.7 SP1 FOXA2 TCF12 YY1 GABPA NR2F2 ZNF335 RAD21 HNF4A RXRA IRAK3 TMBIM4 ENSG00000228144 ENSG00000256072 LLPH LLPH-DT HELB RBMS1P1 piR-50443-083
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RBMS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RBMS1P1 Gene

Genomic Locations for RBMS1P1 Gene
chr12:66,233,016-66,235,234
(GRCh38/hg38)
Size:
2,219 bases
Orientation:
Minus strand
chr12:66,626,796-66,629,014
(GRCh37/hg19)
Size:
2,219 bases
Orientation:
Minus strand

Genomic View for RBMS1P1 Gene

Genes around RBMS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBMS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBMS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBMS1P1 Gene

Proteins for RBMS1P1 Gene

Post-translational modifications for RBMS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBMS1P1 Gene

Domains & Families for RBMS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RBMS1P1 Gene

Function for RBMS1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBMS1P1 Gene

Localization for RBMS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RBMS1P1 Gene

Pathways & Interactions for RBMS1P1 Gene

PathCards logo

SuperPathways for RBMS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RBMS1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RBMS1P1 Gene

Drugs & Compounds for RBMS1P1 Gene

No Compound Related Data Available

Transcripts for RBMS1P1 Gene

mRNA/cDNA for RBMS1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RBMS1P1 Gene

No ASD Table

Relevant External Links for RBMS1P1 Gene

GeneLoc Exon Structure for
RBMS1P1

Expression for RBMS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RBMS1P1 Gene

mRNA differential expression in normal tissues according to GTEx for RBMS1P1 Gene

This gene is overexpressed in Whole Blood (x5.6).
genes like me logo Genes that share expression patterns with RBMS1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBMS1P1 Gene

Orthologs for RBMS1P1 Gene

Evolution for RBMS1P1 Gene

ENSEMBL:
Gene Tree for RBMS1P1 (if available)
TreeFam:
Gene Tree for RBMS1P1 (if available)

No data available for Orthologs for RBMS1P1 Gene

Paralogs for RBMS1P1 Gene

No data available for Paralogs for RBMS1P1 Gene

Variants for RBMS1P1 Gene

Additional Variant Information for RBMS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBMS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RBMS1P1 Gene

Disorders for RBMS1P1 Gene

No disorders were found for RBMS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RBMS1P1 Gene

Publications for RBMS1P1 Gene

  1. Cloning and characterization of the genomic DNA of the human MSSP genes. (PMID: 8871567) Haigermoser C … Ariga H (Nucleic acids research 1996) 2 3

Products for RBMS1P1 Gene

Sources for RBMS1P1 Gene