Aliases for RBM8B Gene

Aliases for RBM8B Gene

  • RNA Binding Motif Protein 8B Pseudogene 2 3 5
  • RNA Binding Motif Protein 8 Pseudogene 3
  • Ribonucleoprotein RBM8 Pseudogene 3

External Ids for RBM8B Gene

Previous GeneCards Identifiers for RBM8B Gene

  • GC14U990458
  • GC14P058854
  • GC14P059934
  • GC14P060864

Summaries for RBM8B Gene

GeneCards Summary for RBM8B Gene

RBM8B (RNA Binding Motif Protein 8B Pseudogene) is a Pseudogene.

Additional gene information for RBM8B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RBM8B Gene

Genomics for RBM8B Gene

GeneHancer (GH) Regulatory Elements for RBM8B Gene

Promoters and enhancers for RBM8B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J060397 Promoter 0.3 Ensembl 500.7 +0.3 301 0.8 RBM8B C14orf39 GNRHR2P1
GH14J059481 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.7 -913.7 -913662 5.5 ZBTB40 CTCF NRF1 TCF12 MYC POLR2G USF1 SP1 NCOR1 PHF8 L3HYPDH JKAMP SCOCP1 GPR135 PCNX4 RBM8B lnc-L3HYPDH-1 ENSG00000258782
GH14J059405 Enhancer 1.1 FANTOM5 Ensembl ENCODE 4.8 -990.5 -990498 2.8 NCOR1 FOS MAFF MAFK JUND CREM FOXP1 TCF12 RAD21 GATA2 piR-48222-125 L3HYPDH JKAMP RTN1 DAAM1 RBM8B RF00017-1571
GH14J059424 Enhancer 0.7 Ensembl ENCODE 5.4 -971.0 -970998 5 CTCF FOS ZIC2 NR2F2 FOSL1 RAD21 RXRA GLIS1 JUN SPI1 FJ601684-116 RF00017-1571 L3HYPDH JKAMP DAAM1 RBM8B lnc-GPR135-1 GPR135
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RBM8B on UCSC Golden Path with GeneCards custom track

Genomic Locations for RBM8B Gene

Genomic Locations for RBM8B Gene
chr14:60,397,699-60,400,514
(GRCh38/hg38)
Size:
2,816 bases
Orientation:
Plus strand
chr14:60,864,446-60,867,232
(GRCh37/hg19)
Size:
2,787 bases
Orientation:
Plus strand

Genomic View for RBM8B Gene

Genes around RBM8B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM8B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM8B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM8B Gene

Proteins for RBM8B Gene

Post-translational modifications for RBM8B Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM8B Gene

Domains & Families for RBM8B Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RBM8B Gene

Function for RBM8B Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM8B Gene

Localization for RBM8B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RBM8B Gene

Pathways & Interactions for RBM8B Gene

PathCards logo

SuperPathways for RBM8B Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RBM8B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RBM8B Gene

Drugs & Compounds for RBM8B Gene

No Compound Related Data Available

Transcripts for RBM8B Gene

mRNA/cDNA for RBM8B Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM8B Gene

No ASD Table

Relevant External Links for RBM8B Gene

GeneLoc Exon Structure for
RBM8B

Expression for RBM8B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RBM8B Gene

genes like me logo Genes that share expression patterns with RBM8B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM8B Gene

Orthologs for RBM8B Gene

Evolution for RBM8B Gene

ENSEMBL:
Gene Tree for RBM8B (if available)
TreeFam:
Gene Tree for RBM8B (if available)

No data available for Orthologs for RBM8B Gene

Paralogs for RBM8B Gene

No data available for Paralogs for RBM8B Gene

Variants for RBM8B Gene

Additional Variant Information for RBM8B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBM8B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RBM8B Gene

Disorders for RBM8B Gene

No disorders were found for RBM8B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RBM8B Gene

Publications for RBM8B Gene

  1. Identification and structural analysis of human RBM8A and RBM8B: two highly conserved RNA-binding motif proteins that interact with OVCA1, a candidate tumor suppressor. (PMID: 11013075) Salicioni AM … Godwin AK (Genomics 2000) 2 3 54
  2. The genes encoding the type II gonadotropin-releasing hormone receptor and the ribonucleoprotein RBM8A in humans overlap in two genomic loci. (PMID: 11707068) Faurholm B … Katz AA (Genomics 2001) 3 54

Products for RBM8B Gene

Sources for RBM8B Gene