Aliases for RBM15-AS1 Gene

Subcategory (RNA class) for RBM15-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for RBM15-AS1 Gene

  • RBM15 Antisense RNA 1 2 3 5
  • RBM15-AS1 2 5 165
  • AS-RBM15 2 3
  • NONHSAG002376.2 91
  • NONHSAG002375.2 91
  • HSALNG0005967 164

External Ids for RBM15-AS1 Gene

Summaries for RBM15-AS1 Gene

GeneCards Summary for RBM15-AS1 Gene

RBM15-AS1 (RBM15 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RBM15-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RBM15-AS1 Gene

Genomics for RBM15-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RBM15-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RBM15-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RBM15-AS1 Gene

Genomic Locations for RBM15-AS1 Gene
chr1:110,282,599-110,339,171
(GRCh38/hg38)
Size:
56,573 bases
Orientation:
Minus strand
chr1:110,828,997-110,881,793
(GRCh37/hg19)
Size:
52,797 bases
Orientation:
Minus strand

Genomic View for RBM15-AS1 Gene

Genes around RBM15-AS1 on UCSC Golden Path with GeneCards custom track
RBM15-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
RBM15-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM15-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM15-AS1 Gene

Proteins for RBM15-AS1 Gene

Post-translational modifications for RBM15-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM15-AS1 Gene

Domains & Families for RBM15-AS1 Gene

Gene Families for RBM15-AS1 Gene

genes like me logo Genes that share domains with RBM15-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RBM15-AS1 Gene

Function for RBM15-AS1 Gene

Phenotypes From GWAS Catalog for RBM15-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM15-AS1 Gene

Localization for RBM15-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RBM15-AS1 Gene

Pathways & Interactions for RBM15-AS1 Gene

PathCards logo

SuperPathways for RBM15-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RBM15-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RBM15-AS1 Gene

Drugs & Compounds for RBM15-AS1 Gene

No Compound Related Data Available

Transcripts for RBM15-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RBM15-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000048F3DC_9606 lncRNA 2611 3

Ensembl: ENST00000449169 (view in UCSC) ,

LNCipedia: RBM15-AS1:19,

NONCODE: NONHSAT005107.2,

URS000075C697_9606 lncRNA 2609 2

HGNC: 53636,

RefSeq: NR_036595,

URS0000D5BD56_9606 lncRNA 439 2

LncBook: HSALNT0012377,

LNCipedia: RBM15-AS1:26,

URS0000D5D631_9606 lncRNA 431 2

LncBook: HSALNT0012375,

LNCipedia: RBM15-AS1:24,

URS00008B620A_9606 lncRNA 405 2

LNCipedia: RBM15-AS1:33,

NONCODE: NONHSAT005108.2,

RBM15-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for RBM15-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for RBM15-AS1 Gene

No ASD Table

Relevant External Links for RBM15-AS1 Gene

GeneLoc Exon Structure for
RBM15-AS1

Expression for RBM15-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for RBM15-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM15-AS1 Gene

Orthologs for RBM15-AS1 Gene

Evolution for RBM15-AS1 Gene

ENSEMBL:
Gene Tree for RBM15-AS1 (if available)
TreeFam:
Gene Tree for RBM15-AS1 (if available)

No data available for Orthologs for RBM15-AS1 Gene

Paralogs for RBM15-AS1 Gene

No data available for Paralogs for RBM15-AS1 Gene

Variants for RBM15-AS1 Gene

Additional dbSNP identifiers (rs#s) for RBM15-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for RBM15-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1001876 CNV insertion 20482838
esv3310454 CNV novel sequence insertion 20981092
esv3330024 CNV insertion 20981092
esv3334121 CNV insertion 20981092
esv3587164 CNV loss 21293372
nsv946135 CNV duplication 23825009

Additional Variant Information for RBM15-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RBM15-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for RBM15-AS1 Gene

Disorders for RBM15-AS1 Gene

No disorders were found for RBM15-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBM15-AS1 Gene

Publications for RBM15-AS1 Gene

  1. The AS-RBM15 lncRNA enhances RBM15 protein translation during megakaryocyte differentiation. (PMID: 27118388) Tran NT … Zhao X (EMBO reports 2016) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for RBM15-AS1 Gene

Sources for RBM15-AS1 Gene