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Aliases for RBM12B-AS1 Gene

Subcategory (RNA class) for RBM12B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RBM12B-AS1 Gene

  • RBM12B Antisense RNA 1 2 3 4 5
  • RBM12B Antisense RNA 1 (Non-Protein Coding) 2 3
  • C8orf39 3 4
  • Chromosome 8 Open Reading Frame 39 2
  • RBM12B Antisense Gene Protein 1 4
  • PRO1905 3

External Ids for RBM12B-AS1 Gene

Previous HGNC Symbols for RBM12B-AS1 Gene

  • C8orf39

Previous GeneCards Identifiers for RBM12B-AS1 Gene

  • GC08P094754

Summaries for RBM12B-AS1 Gene

GeneCards Summary for RBM12B-AS1 Gene

RBM12B-AS1 (RBM12B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RBM12B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RBM12B-AS1 Gene

Genomics for RBM12B-AS1 Gene

GeneHancer (GH) Regulatory Elements for RBM12B-AS1 Gene

Promoters and enhancers for RBM12B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I093738 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 +0.1 111 3.4 HDGF FOXA2 ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B YY1 LOC105375645 RBM12B RBM12B-AS1 VIRMA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RBM12B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RBM12B-AS1 Gene

Genomic Locations for RBM12B-AS1 Gene
709 bases
Plus strand

Genomic View for RBM12B-AS1 Gene

Genes around RBM12B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RBM12B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RBM12B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RBM12B-AS1 Gene

Proteins for RBM12B-AS1 Gene

  • Protein details for RBM12B-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by RBM12B-AS1
    Protein Accession:

    Protein attributes for RBM12B-AS1 Gene

    102 amino acids
    Molecular mass:
    11378 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RBM12B-AS1 Gene

Post-translational modifications for RBM12B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RBM12B-AS1 Gene

Domains & Families for RBM12B-AS1 Gene

Protein Domains for RBM12B-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RBM12B-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RBM12B-AS1 Gene

Function for RBM12B-AS1 Gene

Phenotypes for RBM12B-AS1 Gene

GenomeRNAi human phenotypes for RBM12B-AS1:
genes like me logo Genes that share phenotypes with RBM12B-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RBM12B-AS1 Gene

Localization for RBM12B-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RBM12B-AS1 gene
Compartment Confidence
nucleus 3
mitochondrion 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RBM12B-AS1 Gene

Pathways & Interactions for RBM12B-AS1 Gene

SuperPathways for RBM12B-AS1 Gene

No Data Available

Interacting Proteins for RBM12B-AS1 Gene

Selected Interacting proteins: Q9P1G2-RBAS1_HUMAN for RBM12B-AS1 Gene via IID

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for RBM12B-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RBM12B-AS1 Gene

Drugs & Compounds for RBM12B-AS1 Gene

No Compound Related Data Available

Transcripts for RBM12B-AS1 Gene

mRNA/cDNA for RBM12B-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RBM12B-AS1 Gene

RBM12B antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RBM12B-AS1 Gene

No ASD Table

Relevant External Links for RBM12B-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RBM12B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RBM12B-AS1 Gene

Protein differential expression in normal tissues from HIPED for RBM12B-AS1 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RBM12B-AS1 Gene

Protein tissue co-expression partners for RBM12B-AS1 Gene

SOURCE GeneReport for Unigene cluster for RBM12B-AS1 Gene:

genes like me logo Genes that share expression patterns with RBM12B-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RBM12B-AS1 Gene

Orthologs for RBM12B-AS1 Gene

Evolution for RBM12B-AS1 Gene

Gene Tree for RBM12B-AS1 (if available)
Gene Tree for RBM12B-AS1 (if available)

No data available for Orthologs for RBM12B-AS1 Gene

Paralogs for RBM12B-AS1 Gene

No data available for Paralogs for RBM12B-AS1 Gene

Variants for RBM12B-AS1 Gene

Sequence variations from dbSNP and Humsavar for RBM12B-AS1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000019856 -- 93,739,968(+) A/G upstream_transcript_variant
rs1000436730 -- 93,741,060(+) A/G downstream_transcript_variant
rs1001468709 -- 93,738,764(+) T/TT upstream_transcript_variant
rs1002509829 -- 93,739,629(+) C/G/T upstream_transcript_variant
rs1003906843 -- 93,740,075(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RBM12B-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1022473 CNV loss 25217958
nsv6309 CNV insertion 18451855
nsv831399 CNV loss 17160897

Variation tolerance for RBM12B-AS1 Gene

Gene Damage Index Score: 10.00; 89.99% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for RBM12B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RBM12B-AS1 Gene

Disorders for RBM12B-AS1 Gene

Additional Disease Information for RBM12B-AS1

No disorders were found for RBM12B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RBM12B-AS1 Gene

Publications for RBM12B-AS1 Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C … Lander ES (Nature 2006) 4 58

Products for RBM12B-AS1 Gene

Sources for RBM12B-AS1 Gene

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