RASSF8-AS1 Gene (RNA Gene)

RASSF8 Antisense RNA 1

GC12M025939
GIFtS:
11
See more...

Aliases for RASSF8-AS1 Gene

Data sources for RASSF8-AS1 Gene:

Subcategory (RNA class) for RASSF8-AS1 Gene

lncRNA

Aliases for RASSF8-AS1 Gene

External Ids for RASSF8-AS1 Gene

Previous GeneCards Identifiers for RASSF8-AS1 Gene

  • GC12M026092

Summaries for RASSF8-AS1 Gene

GeneCards Summary for RASSF8-AS1 Gene

RASSF8-AS1 (RASSF8 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RASSF8-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RASSF8-AS1 Gene

Genomics for RASSF8-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RASSF8-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RASSF8-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RASSF8-AS1 Gene

Latest Assembly
chr12:25,924,174-25,960,307
(GRCh38/hg38)
Size:
36,134 bases
Orientation:
Minus strand

Previous Assembly
chr12:26,107,587-26,112,375
(GRCh37/hg19 by Entrez Gene)
Size:
4,789 bases
Orientation:
Minus strand

chr12:26,092,262-26,112,698
(GRCh37/hg19 by Ensembl)
Size:
20,437 bases
Orientation:
Minus strand

Genomic View for RASSF8-AS1 Gene

Genes around RASSF8-AS1 on UCSC Golden Path with GeneCards custom track
RASSF8-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
RASSF8-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RASSF8-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RASSF8-AS1 Gene

Proteins for RASSF8-AS1 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RASSF8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RASSF8-AS1 Gene

Domains & Families for RASSF8-AS1 Gene

Gene Families for RASSF8-AS1 Gene

HGNC:
genes like me logo Genes that share domains with RASSF8-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RASSF8-AS1 Gene

Function for RASSF8-AS1 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RASSF8-AS1 Gene

Localization for RASSF8-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RASSF8-AS1 Gene

Pathways & Interactions for RASSF8-AS1 Gene

PathCards logo

SuperPathways for RASSF8-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RASSF8-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RASSF8-AS1 Gene

Drugs & Compounds for RASSF8-AS1 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for RASSF8-AS1 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RASSF8-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000144123_9606 lncRNA 2610 4

Ensembl: ENST00000500276 (view in UCSC) ,

LncBook: HSALNT0186864,

LNCipedia: RASSF8-AS1:8,

NONCODE: NONHSAT027367.2,

URS000025E8C4_9606 lncRNA 1121 4

Ensembl: ENST00000535436 (view in UCSC) ,

LncBook: HSALNT0186901, HSALNT0186902,

LNCipedia: RASSF8-AS1:1, RASSF8-AS1:25,

NONCODE: NONHSAT027380.2,

URS00005C15A8_9606 lncRNA 819 4

Ensembl: ENST00000542086 (view in UCSC) ,

LncBook: HSALNT0186900,

LNCipedia: RASSF8-AS1:6,

NONCODE: NONHSAT027379.2,

URS0000486CCA_9606 lncRNA 621 4

Ensembl: ENST00000502069 (view in UCSC) ,

LncBook: HSALNT0186887,

LNCipedia: RASSF8-AS1:4,

NONCODE: NONHSAT027375.2,

URS0000397DE8_9606 lncRNA 536 4

Ensembl: ENST00000545226 (view in UCSC) ,

LncBook: HSALNT0186890,

LNCipedia: RASSF8-AS1:7,

NONCODE: NONHSAT027376.2,

RASSF8-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for RASSF8-AS1 Gene

8 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for RASSF8-AS1 Gene

No ASD Table

Relevant External Links for RASSF8-AS1 Gene

GeneLoc Exon Structure for
RASSF8-AS1

Expression for RASSF8-AS1 Gene

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mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RASSF8-AS1 Gene

mRNA expression in normal human tissues for RASSF8-AS1 Gene
mRNA expression by GTEx for RASSF8-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for RASSF8-AS1

genes like me logo Genes that share expression patterns with RASSF8-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RASSF8-AS1 Gene

Orthologs for RASSF8-AS1 Gene

Evolution for RASSF8-AS1 Gene

ENSEMBL:
Gene Tree for RASSF8-AS1 (if available)
TreeFam:
Gene Tree for RASSF8-AS1 (if available)

No data available for Orthologs for RASSF8-AS1 Gene

Paralogs for RASSF8-AS1 Gene

No data available for Paralogs for RASSF8-AS1 Gene

Variants for RASSF8-AS1 Gene

Products:

  1. SNP Genotyping and Copy Number Assays for research

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for RASSF8-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for RASSF8-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv784n106 CNV deletion 24896259
esv26656 CNV gain+loss 19812545
esv2759886 CNV loss 17122850
nsv1069654 CNV deletion 25765185
nsv557802 CNV gain 21841781

Additional Variant Information for RASSF8-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RASSF8-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for RASSF8-AS1 Gene

Disorders for RASSF8-AS1 Gene

Additional Disease Information for RASSF8-AS1

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform

No disorders were found for RASSF8-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RASSF8-AS1 Gene

Publications for RASSF8-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

ExternalLinks

View latest publications for RASSF8-AS1 gene in Mastermind

Products for RASSF8-AS1 Gene

Sources for RASSF8-AS1 Gene