RARS1P1 Gene (Pseudogene)

Arginyl-TRNA Synthetase 1 Pseudogene 1

GC12P027506
GIFtS:
4
See more...

Aliases for RARS1P1 Gene

Aliases for RARS1P1 Gene

  • Arginyl-TRNA Synthetase 1 Pseudogene 1 2 3 5
  • Arginyl-TRNA Synthetase Pseudogene 1 2 3
  • RARS1P1 5
  • RARSP1 3

External Ids for RARS1P1 Gene

Previous HGNC Symbols for RARS1P1 Gene

  • RARSP1

Previous GeneCards Identifiers for RARS1P1 Gene

  • GC12P027500
  • GC12P027504

Summaries for RARS1P1 Gene

GeneCards Summary for RARS1P1 Gene

RARS1P1 (Arginyl-TRNA Synthetase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for RARS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RARS1P1 Gene

Genomics for RARS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RARS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J027493 Enhancer 0.3 Ensembl 0.7 -3.3 -3324 0.4 FOXA1 JUND SMCO2 PPFIBP1 ARNTL2-AS1 REP15 RARS1P1 piR-61945-094
GH12J027463 Enhancer 0.4 ENCODE 0.3 -32.7 -32654 0.6 JUND ZFHX2 EGR2 piR-61945-094 SMCO2 RARS1P1 PPFIBP1
GH12J027470 Enhancer 0.3 Ensembl 0.3 -26.2 -26224 0.6 PRDM4 YY2 SMCO2 piR-61945-094 RARS1P1 PPFIBP1
GH12J027473 Enhancer 0.3 Ensembl 0.4 -22.5 -22524 1.2 JUND PPFIBP1 SMCO2 ARNTL2-AS1 piR-61945-094 RARS1P1
GH12J027472 Enhancer 0.2 Ensembl 0.4 -23.4 -23424 0.2 PPFIBP1 piR-61945-094 RARS1P1 SMCO2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RARS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RARS1P1 Gene

Genomic Locations for RARS1P1 Gene
chr12:27,496,925-27,498,683
(GRCh38/hg38)
Size:
1,759 bases
Orientation:
Plus strand
chr12:27,649,870-27,651,522
(GRCh37/hg19)
Size:
1,653 bases
Orientation:
Plus strand

Genomic View for RARS1P1 Gene

Genes around RARS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RARS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RARS1P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RARS1P1 Gene

Proteins for RARS1P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RARS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RARS1P1 Gene

Domains & Families for RARS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RARS1P1 Gene

Function for RARS1P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RARS1P1 Gene

Localization for RARS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RARS1P1 Gene

Pathways & Interactions for RARS1P1 Gene

PathCards logo

SuperPathways for RARS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RARS1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RARS1P1 Gene

Drugs & Compounds for RARS1P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RARS1P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RARS1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RARS1P1 Gene

No ASD Table

Relevant External Links for RARS1P1 Gene

GeneLoc Exon Structure for
RARS1P1

Expression for RARS1P1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RARS1P1 Gene

Orthologs for RARS1P1 Gene

Evolution for RARS1P1 Gene

ENSEMBL:
Gene Tree for RARS1P1 (if available)
TreeFam:
Gene Tree for RARS1P1 (if available)

No data available for Orthologs for RARS1P1 Gene

Paralogs for RARS1P1 Gene

No data available for Paralogs for RARS1P1 Gene

Variants for RARS1P1 Gene

Additional Variant Information for RARS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RARS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RARS1P1 Gene

Disorders for RARS1P1 Gene

No disorders were found for RARS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RARS1P1 Gene

Publications for RARS1P1 Gene

No publications were found for RARS1P1 Gene.

No data available for Mastermind for RARS1P1 Gene

Products for RARS1P1 Gene

Sources for RARS1P1 Gene